Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01342 ATGGTCCCAATTGGTCATGCTTCTGATGACAAGCAGAGAAATCAAGACTCAGGAGAAATCGTTTTGGAGAAAGACAAAAGTGTGGTAACACTAAGAGAACTCTTTGAAGAATGCATTAGTGACACTGACAAATCTCATCAACCACCTGAATTTGCAAGCAGTAATCCAAGCTCAAGGACACGGTTTCACTGGAGGATGTTTTTAAAACCATGCAAAATGAGATCAATGGAGCACCTACCCTCTTTTCCTTCAAGTTGTTTGTCAAGCATAACAAAGCCTACAAGCAAAGACATTGGAAAAAACACTATTCAATGTAATCCACACAGTTCCAGAACTTTGGTGAATTTCAGGCTTTCTGACCTGAGAAATGCAACCAACAACTTTAGCAATGGTCCAGATAAAAATATATTAGATTGGAGCAAAAGGTATAAAATAATTTTGGGGATAGCGGATGGCCTCCTCTATCTTCATGAGATTTGTCAAAGGCGAATCGTTCATAGAGATCTTAAATCAGATAATATTCTGCTGACAGAGAATTTTGAGCCACAGATTTGTGATTTTGGGCTCTCAAAATGGCTACCAGAACCCTGTACTCATCATATTGTTTCAAAATTTGAAGGCACAATGGGGTATTTTGCTCCTGAGTATTTGACGCTTGGCATAGTAAACGAAAAAACTGATATTTATTCCTTTGGGGTCTTACTTTTGGAGATTATAACTGGGCGTCATGCTTTGGATCATTTGAAAGAAAGTATTGTGTCATGGGCAAAGCCTTTATTCCAAGCTAATAATATTAAGGACCTTGTTGATCCTTCTCTGGGTGATGATTATGTCTGGGAACAAATGGAACGTGTTGTTTTGACAGCATCTCTGTGTGTTGAGCAGTTTCCTATCTTACGCCCCAGCATGAGTCAGATTGCAGTACTGCTAAGAGGTGATGACTATGTGATGGAACATAGTGAGAGGAGTAACAAGATGCCGAAGAAAACAACTGAAGGAGCTATCTAA 1008 0.3919 MVPIGHASDDKQRNQDSGEIVLEKDKSVVTLRELFEECISDTDKSHQPPEFASSNPSSRTRFHWRMFLKPCKMRSMEHLPSFPSSCLSSITKPTSKDIGKNTIQCNPHSSRTLVNFRLSDLRNATNNFSNGPDKNILDWSKRYKIILGIADGLLYLHEICQRRIVHRDLKSDNILLTENFEPQICDFGLSKWLPEPCTHHIVSKFEGTMGYFAPEYLTLGIVNEKTDIYSFGVLLLEIITGRHALDHLKESIVSWAKPLFQANNIKDLVDPSLGDDYVWEQMERVVLTASLCVEQFPILRPSMSQIAVLLRGDDYVMEHSERSNKMPKKTTEGAI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01342 335 MobiDBLite consensus disorder prediction 1 20 - -
Phac6g01342 335 SMART serkin_6 14 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01342 335 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 125 324 - -
Phac6g01342 335 PANTHER OS08G0249100 PROTEIN 133 325 IPR046958 -
Phac6g01342 335 Gene3D Transferase(Phosphotransferase) domain 1 119 331 - -
Phac6g01342 335 ProSiteProfiles Protein kinase domain profile. 1 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01342 335 SUPERFAMILY Protein kinase-like (PK-like) 132 310 IPR011009 -
Phac6g01342 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Phac6g01342 335 Pfam Protein kinase domain 136 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01342 Phac-Chr6 16275444 16280475 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01342 133 306 Trihelix Transcription Factor Family AT1G68690 46.154 1.25e-49 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phac6g01342 Pkinase 6.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01342 - - ccaj:109789909 350.132