Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01319 ATGTGTTTGTCTGAGGGAGAGAGAGTAATGGCGTTAGAAGCAGTAGTATATCCCCAACCCCAGGACCCGTTTGGCTGTGCAATCAAAGACCCCTACAACTACAACAACTTGTTAGAAGCTGCTGCAGGCAACTGGGGTTATGCAGATTTCACCCTTGAAAAAGAAGACCAAGCTTGTGTCACTTTTATGGACAACCAAACAGAGAATTATCCCTATGGAGAATGGAACTCTTCTCCTCCATCCTTGTTGCCTCACAACATGAATGCATCAAATCCTCCTTCAGAAACCAGCAACACGCAGAACAACTTAGATAGTTCAGTCTCCACCCCAGCTCGTCCCAAGAGGCGCAGAACCAAAAGCAGGAAGAATAAGGAAGAGATTGAGAACCAGAGAATGACTCACATTGCTGTAGAGCGCAACAGAAGGAAGCAAATGAACGAGTACCTCTCTGTTCTTCGCTCTCTAATGCCTGAATCTTACGTCCAAAGGGGTGATCAAGCATCTATTATTGGGGGTGCTATCAACTTTGTTAAGGAGCTTGAGCAGAGGCTGCAATTTCTTGGTGCTCAGAAGGAAAAAGAGGGGAAACCTGATGTGCCCTTTTCTGAGTTCTTCTCATTTCCTCAGTACTCAACAAGTGCCAGTGGTGGCTGTGATAACTCTGCAGCCATGAGTGAGCAAAAGGGTGAGGTTCAGTCTGGCATTGCTGACATAGAAGTGACAATGGTAGAGAGCCATGCAAATCTCAAAATAAGATCCAAGAAACGGCCAAAGCAGCTCTTGAAAATAGTATCTAGTTTGCATGGCATGCGTCTCACAATCTTGCACCTAAATGTTACCACCACCAAGGAAATTGTCCTCTATTCTCTCAGTGTCAAGGTTGAAGAAGATTGCAAGCTGGGATCGGTGGATGAGATAGCTGCAGCTGTATACCAAATGCTGAATAGGATCCAACAAGAGTGA 963 0.4538 MCLSEGERVMALEAVVYPQPQDPFGCAIKDPYNYNNLLEAAAGNWGYADFTLEKEDQACVTFMDNQTENYPYGEWNSSPPSLLPHNMNASNPPSETSNTQNNLDSSVSTPARPKRRRTKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQRLQFLGAQKEKEGKPDVPFSEFFSFPQYSTSASGGCDNSAAMSEQKGEVQSGIADIEVTMVESHANLKIRSKKRPKQLLKIVSSLHGMRLTILHLNVTTTKEIVLYSLSVKVEEDCKLGSVDEIAAAVYQMLNRIQQE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01319 320 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 193 IPR036638 GO:0046983
Phac6g01319 320 MobiDBLite consensus disorder prediction 70 109 - -
Phac6g01319 320 Gene3D - 114 195 IPR036638 GO:0046983
Phac6g01319 320 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 129 180 IPR011598 GO:0046983
Phac6g01319 320 CDD bHLH_AtFAMA_like 132 203 - -
Phac6g01319 320 SMART finulus 135 186 IPR011598 GO:0046983
Phac6g01319 320 MobiDBLite consensus disorder prediction 70 128 - -
Phac6g01319 320 Pfam Helix-loop-helix DNA-binding domain 130 181 IPR011598 GO:0046983
Phac6g01319 320 PANTHER MAX DIMERIZATION, MAD 37 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01319 Phac-Chr6 16123011 16125390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01319 10 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 47.352 1.06e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac6g01319 HLH 7.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01319 - - gmx:100777413 560.066