Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01312 ATGGATCATCAAGGGCATGGCCAGAACCCATCGATGGGGGTTGTTGGTAGTGGAGCTCAATTAACATATGGTTCTAACCCATATCAGCAAGGGCAACTAACTGGGCCGCCCGGGTCGGTTGTGACTTCGGTTGGGACCATTCAATCCACCGGTCAACCTGCTGGAGCACAGCTTGGACAGCATCAACTTGCTTATCAGCATATTCATCAGCAACAACAACATCAGCTTCAGCAGCAGCTCCAACAATTTTGGTCAAGTCAGTACCAAGAAATTGAGAAGGTTACCGATTTCAAGAACCACAGTCTTCCCTTGGCAAGGATCAAGAAGATTATGAAGGCTGACGAGGATGTTAGAATGATATCAGCCGAGGCACCAGTCATATTTGCCAGGGCATGTGAAATGTTTATATTAGAGTTGACCCTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGCGAACACTTCAAAAAAATGACATTGCTGCAGCAATCACAAGGACTGACATCTTTGATTTCTTGGTTGACATTGTACCCCGTGAGGACTTGAAAGATGAAGTGCTTGCATCTATCCCTAGAGGAACAATGCCTGTTGGAGGGCCCCCTGATGCACTTCCATACTGCTACATGCAGCCTCAGCATGCGCCTCAAGTTGGAACTGCTGGTGTCATAATGGGTAAGCCAGTGATGGACCCAAACATGTATGCTCAGCAGTCTCACCCCTACATGGCACCACAAATGTGGCCCCAGCCTCCAGACCAACGTCAACCATCCCCAGAACATTAG 783 0.4802 MDHQGHGQNPSMGVVGSGAQLTYGSNPYQQGQLTGPPGSVVTSVGTIQSTGQPAGAQLGQHQLAYQHIHQQQQHQLQQQLQQFWSSQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVGGPPDALPYCYMQPQHAPQVGTAGVIMGKPVMDPNMYAQQSHPYMAPQMWPQPPDQRQPSPEH* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01312 260 MobiDBLite consensus disorder prediction 1 21 - -
Phac6g01312 260 FunFam Nuclear transcription factor Y subunit gamma 66 179 - -
Phac6g01312 260 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 101 164 IPR003958 -
Phac6g01312 260 SUPERFAMILY Histone-fold 72 173 IPR009072 GO:0046982
Phac6g01312 260 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 64 200 - -
Phac6g01312 260 Gene3D Histone, subunit A 63 179 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01312 Phac-Chr6 16070918 16074092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01312 1 247 CCAAT-HAP5 Transcription Factor Family AT1G08970 60.484 1.49e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phac6g01312 CBFD_NFYB_HMF 5.8e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01312 K08066 - gmx:100527803 456.832