Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01271 ATGAGGTTCATCATTACCTTGTTGGTGTTCCTATCGTTGCAAAGAGCCAACATTTTGACTGTGGATGCCGCGTGGAGTGCAGTAGGAAATGAAAATCAAATCAAGAAAACCTTAGGAGTGGATGAGAACGAAAACAAGGAAACTCCTAGACTTGAAAACTTCAGAACTTTGCTTGGACTCAAGTCACTCAACAGGTTTCACACAAGAAGGTCATGCTGTGGCGTTTTTGACTCTGAATTTGTGTCCCTCTCAGCTTCTCTGCCATCCAAAACCGAAGCTGAAGCTCAGAATTCGGAGCTGCACGTGCACCCTGGTTCCTATCAGCCACATAGGAGCATGCCACTTCGCAAGATTCAACAACAAGATAGAGGTAGCTCAGATAGAACAACACTAGTGGCTGTTGTAGTATCTGGTGGAGTTGCTACCTTAATCTGTGCACTCGGGTGTGTCTGTGTTTGCAAGAGATTTAGGAATCAGAAACGGAAACCCAATAGGACAATGCCACTCTTTAGCAAAAACGGAAGAACAGGAGGTACGTACCATCATTCATCAAGCAATGTGAGTTTAAACTCTGACCCTGATTTGCTTTACCTGGAACAAACTTGTGAGACACAAAGTATCACTTCAAACCATAGTTCCCTAAAACGTGCAATTTATGAGAAGAAAGCGTTGAATCAAGAAGAACATGACAATGCCAGCACTGCCAGTTCTTCCACCAAGGAAACTCTCTCTGTTCACGAGGATTTGGAATATGATGGTGGCAAAGCTTCCTCTGGAGAAAAAACTGTCCCTGAAGAAAGTCATTCATCATCAGATTACGGAAGTTTTCATTCATGTGTTGAAACAGAACCACTGTTTCTCTGTCCTACAAATTTAATTTCCGCGACAGCTCAATTTCCTTGTTCTTCTCACAATTCAACTTCAAAGGTAGAATCTAACCAATCGCCATCCATTCCAAAGCATGAAGAGCAAAAGAGGAGTGAAACTTCTCAACCTAGCATTCCTCCCCCACCAAGCCCACCTCCGTTTTTGAAAGAAAACATTAAAAGTGTGATCAAAACCCCACCTTCTCAACAACTGCCAAAACTCAAACCACTTCATTGGGACAAAGTAAGAGCCACTCCAGATCGAACCATGGTGTGGGATACGCTACGAACAAACTCGTTTGAGTTGGATGAGGTAATGATCGAGTCACTCTTTGGCTACAATTTACAAAATTCAATAAAGAACAACGAAACAAAGAGTAAAACCCAGTCTCCTAAAGAGCATGTACTTGAGCCAAAACGGTTGCAAAATATAGCAATACTCTCTAAGGCTCTAAATATCACAGCAGAAGAAGTATGCGAGGCCCTGAAACTAGGGAAGGGTTTGTCTTTGCAACAACTGGAGGCACTGGTAAAAATGGTGCCAACGAAGGAAGAAGAGCATAAACTCTTGAACTACAAGGGACCTGTCAATGAACTTGGGTTCGCTGAAAATTTTGTGAGAGTTATGCTTAGCATACCATTTGCCTTTAAACGAGTGGAAGCCATGCTTTACAAAGAAACTTTCGAAGATGAAGTGACTCACATCAGTAACTCTTTCACAATGCTAGAGGAAGCATGCAAGGAACTAAGGTCAAGCAAGTTCTTCTTGAAATTGCTCGAAGCAGTACTCAAAACAGGAAACCGCATGAACGTGGGGACAATCAGGGGAGGTGCTAGAGCCTTCAAACTTGATGCCCTTCTCAAGCTGGCTGATGTGAAAGGAACAGATGGTAAAACCACCTTGCTCCATTTCTTTGTTCAGGAGATAGTTCGCTCAGAAGGAACCAAAGCTTCAAAGAGCATGATGGGACAGAAGAGTGAAAACAGAACGGAGGAAGAGAAGGAAGAAGATTATAGAAGAATGGGACTAAAACTTGTCTCTGGTCTTAGTGCTGAGTTATGCAATGTTAAAAAGACTGCCACGATTGACTTAAACGTGCTTGCAAGTTCTGTGTCGAACCTATCAAATGGGTTGGCTAACATGCAGAACCTAGTAAAAGGGTTGTTGTATGAAGATGAAAAAAATAAGAGCTTTGTCATTTCTATGAAGTGGTTTCTTAATTATGCAGAAAGAAAGGTGCAAGAGTTGCAAGGAGACGAAGATAGAGTGATGGGTGGTGTAAAAGAAGTAACCGAGTATTTTCATGGGGATGTGAGTGATGAAGAGTCGAATCCACTTCAAATCTTTGTAATCGTGAGGGACTTTCTGGAGATGGTAAACAACGTGTGCAATGGGCTTAAAAGGTCTATGAAATCCCCTCGCACTCATTGCATTGAGTAG 2307 0.4231 MRFIITLLVFLSLQRANILTVDAAWSAVGNENQIKKTLGVDENENKETPRLENFRTLLGLKSLNRFHTRRSCCGVFDSEFVSLSASLPSKTEAEAQNSELHVHPGSYQPHRSMPLRKIQQQDRGSSDRTTLVAVVVSGGVATLICALGCVCVCKRFRNQKRKPNRTMPLFSKNGRTGGTYHHSSSNVSLNSDPDLLYLEQTCETQSITSNHSSLKRAIYEKKALNQEEHDNASTASSSTKETLSVHEDLEYDGGKASSGEKTVPEESHSSSDYGSFHSCVETEPLFLCPTNLISATAQFPCSSHNSTSKVESNQSPSIPKHEEQKRSETSQPSIPPPPSPPPFLKENIKSVIKTPPSQQLPKLKPLHWDKVRATPDRTMVWDTLRTNSFELDEVMIESLFGYNLQNSIKNNETKSKTQSPKEHVLEPKRLQNIAILSKALNITAEEVCEALKLGKGLSLQQLEALVKMVPTKEEEHKLLNYKGPVNELGFAENFVRVMLSIPFAFKRVEAMLYKETFEDEVTHISNSFTMLEEACKELRSSKFFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFFVQEIVRSEGTKASKSMMGQKSENRTEEEKEEDYRRMGLKLVSGLSAELCNVKKTATIDLNVLASSVSNLSNGLANMQNLVKGLLYEDEKNKSFVISMKWFLNYAERKVQELQGDEDRVMGGVKEVTEYFHGDVSDEESNPLQIFVIVRDFLEMVNNVCNGLKRSMKSPRTHCIE* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01271 768 ProSiteProfiles Formin homology-2 (FH2) domain profile. 353 768 IPR015425 -
Phac6g01271 768 MobiDBLite consensus disorder prediction 225 275 - -
Phac6g01271 768 MobiDBLite consensus disorder prediction 301 315 - -
Phac6g01271 768 MobiDBLite consensus disorder prediction 243 267 - -
Phac6g01271 768 PANTHER FORMIN-RELATED 76 759 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Phac6g01271 768 SMART it6_source 348 763 IPR015425 -
Phac6g01271 768 Gene3D Formin, FH2 domain 371 764 IPR042201 -
Phac6g01271 768 SUPERFAMILY Formin homology 2 domain (FH2 domain) 335 756 - -
Phac6g01271 768 Pfam Formin Homology 2 Domain 357 748 IPR015425 -
Phac6g01271 768 MobiDBLite consensus disorder prediction 164 187 - -
Phac6g01271 768 MobiDBLite consensus disorder prediction 605 625 - -
Phac6g01271 768 MobiDBLite consensus disorder prediction 301 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01271 Phac-Chr6 15840797 15844178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01271 335 756 FH2 protein (formin) Gene Family AT3G05470 67.213 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01271 - - gmx:100805407 1053.89