Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01246 ATGAGTCGAGGAAGTGCAGCCGGAGCTAAGGGGAAGAAGAAGGGGGCGACATTTACCATTGACTGTGCGAAGCCAGTGGAAGACAAGATCATGGACATTGCCTCTCTCGAGAAGTTTCTTCAAGAGAGGATCAAGGTTGGTGGCAAAGCTGGTGCTCTTGGTGACTCTGTTACTGTTACCCGCGAGAAGACCAAGATCATTGTCACCTCTGACAGTAACTTCTCCAAACGGTATCTGAAGTACTTGACTAAGAAGTACTTGAAGAAACACAATGTGCGTGACTGGCTCCGAGTGATTGCTTCAAACAAGGATAGAAATATTTATGAACTGAGGTACTTCAACATTGCTGAGAATGAGGGCGAGGAAGAAGATTAG 375 0.4613 MSRGSAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01246 124 PANTHER 60S RIBOSOMAL PROTEIN L22 2 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Phac6g01246 124 Gene3D - 5 124 IPR038526 -
Phac6g01246 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Phac6g01246 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01246 Phac-Chr6 15751853 15753415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01246 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.903 1.71e-68 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01246 K02891 - gmx:100499952 216.083