Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01232 ATGGCTATTTCCAAGCTATTCTTGCGCTTATTCATTGTCTATTTTCTGTGCGTTTTCTGCATCTGTGCATTTTCTGCATCCTCCTCTTCCTCCTCGGAAACCATATGCAACCTCACACCATATTCATCATTTTGCGAATCCAACTCGCCTTCTTATGGCCATGGTGGTGACATACACGAATATACCCGCTTTTTCTTAGAGAAATCCTTGTCATCCTCAAAGATCTTTCTCTCTTTGCTCTCTGAATACCTCAACTCTCCATTCAAGTTCTCAAAGTCCACCATCCTTGCCCTTCAAGATTGCCACCTTCTGACTGACCTAAACAATGGTTTTTTGTCCAGGACCCTAAAAAGCATCAATTCCACAAATACCCTTGGTACCTCAGAAGCTGATACATTGCACACTTTGCTTACTGCTACACTGACCAACCAAGACACGTGCTTAAACAGCCTCCAAGAAACCACGCCAAACCCCGACAATGACCTTCTGTCACATCTTTCCACCGGAACCAAGCTTTATAGCATATCTCTTGCACTTTTCAAGAGAGGATGGGAAGCCAAGAAAAACACAGAGAGAAAATTTGAAAGAAATGATCACATTATGTGGGAACAGAAGCTGTACGAGATTATCAGAAAAAAAGGAAGGAAATTGCTTCGGTCGGGTGCAGACAACGTTGTAGTGAACCAGAGAGTGGTGGTGAACCCAGATGGGTCTGGAAACTACACAACAATCAACGATGCAGTGGCTGCGGCTCCAGATAACTTTAGGGTTATTAACGGTTTTTTCGTGATTCATGTAGTGGGTGGAGTGTATGAAGAGTATGTTTCTATTCCCACAGAGAAGCAGTACCTGATGATGATAGGAGATGGAATTAACCAGACCATAATCACGGGCAATCACAGCGTGGCTGATGGTTGGACTACTTTCAGTTCTGCTACATTCGCTGTGATTGGTCAAGGTTTTGTGGCAATCAACATAACATTTCGCAACACAGCTGGAGCAATGAAGCACCAAGCAGTGGCCCTCAGAAGCGGAGCAGACTTGTCTGCATTTTACAATTGTAGCTTTGAAGGGTACCAAGACACCTTATACGCTCATTCTCTTAGGCAATTTTACAGAGACTGTGATATTTATGGTACGGTGGACTTCATATTTGGTAATGCAGGAGTTGTTTTGCAAAACTGTAGCATCTATCCTAGACTCCCACTGCAACACCAATTCAATGTCATTACTGCACAGGGTAGGACTGACATGAACCAAAATAGTGGCATATCCGTACACCTGTGTACCATAACTGCTGCAAGTGACTTGGCTTCTAGTAATCGCACCATAAAAACATACCTAGGAAGACCCTGGAAACAGTATTCACAAACAGTTTATATGCAATCTTTCATGGACAGTTTGGTAGATCCATTGGGTTGGGTACCTTGGCTAGGGCAGTTTCATTTGGACACCCTTTATTATGCGGAATTTGATAATCAAGGACCTGGATCTGACACTAGTAATAGGGTTACTTGGCCTGGGTATCATGTCATCAATGCTACAGATGCAGTTAATTTTACAGTTGCTAGTTTTATACTAGGTTATCTTTGGCTGCCTGAGACAGGAGTACCTTACTATCCTGATTTAGGAAAATACACACAAATAATGTTGTAA 1656 0.4263 MAISKLFLRLFIVYFLCVFCICAFSASSSSSSETICNLTPYSSFCESNSPSYGHGGDIHEYTRFFLEKSLSSSKIFLSLLSEYLNSPFKFSKSTILALQDCHLLTDLNNGFLSRTLKSINSTNTLGTSEADTLHTLLTATLTNQDTCLNSLQETTPNPDNDLLSHLSTGTKLYSISLALFKRGWEAKKNTERKFERNDHIMWEQKLYEIIRKKGRKLLRSGADNVVVNQRVVVNPDGSGNYTTINDAVAAAPDNFRVINGFFVIHVVGGVYEEYVSIPTEKQYLMMIGDGINQTIITGNHSVADGWTTFSSATFAVIGQGFVAINITFRNTAGAMKHQAVALRSGADLSAFYNCSFEGYQDTLYAHSLRQFYRDCDIYGTVDFIFGNAGVVLQNCSIYPRLPLQHQFNVITAQGRTDMNQNSGISVHLCTITAASDLASSNRTIKTYLGRPWKQYSQTVYMQSFMDSLVDPLGWVPWLGQFHLDTLYYAEFDNQGPGSDTSNRVTWPGYHVINATDAVNFTVASFILGYLWLPETGVPYYPDLGKYTQIML* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01232 551 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 182 IPR035513 -
Phac6g01232 551 FunFam Pectinesterase 224 543 - -
Phac6g01232 551 Pfam Pectinesterase 231 528 IPR000070 GO:0030599|GO:0042545
Phac6g01232 551 Gene3D - 224 543 IPR012334 -
Phac6g01232 551 SUPERFAMILY Pectin lyase-like 228 541 IPR011050 -
Phac6g01232 551 SMART PMEI_2 27 179 IPR006501 GO:0004857
Phac6g01232 551 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 182 IPR035513 -
Phac6g01232 551 NCBIfam pectinesterase inhibitor domain 11 181 IPR006501 GO:0004857
Phac6g01232 551 CDD PMEI-like_3 34 184 - -
Phac6g01232 551 ProSitePatterns Pectinesterase signature 2. 377 386 IPR033131 -
Phac6g01232 551 Pfam Plant invertase/pectin methylesterase inhibitor 33 179 IPR006501 GO:0004857
Phac6g01232 551 PANTHER PECTINESTERASE 18 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01232 Phac-Chr6 15673745 15676917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01232 6 543 Carbohydrate Esterase AT4G02330 51.399 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01232 K01051 - gmx:100801141 812.372