Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01231 ATGGCCATGATTAGTTTCCTTTTCATTCTCATGTTTTTACCCTCCTTTCAGGCTCTCTCATATGAACCCATTCCCTCAGAAATCCAAACACAAGACATGCAAGCATTGATTGCACAAGCATGCATGGACATTGAAAACCAAAACTCCTGCCTCACAAACATCCACAACGAGCTCACCAAAATAGGCCCTCCAAGCCCCACTTCAGTGATGAGTGCAGCACTGAAGGCCACACTCAACGAAGCAGTAATGGCCATTGACAACATGACAAAGATCACCACCTTCTCCGTGAGCTACCGCGAGCAACAAGCCATAGAAGACTGCAAGGAGCTCTTGGATTTCTCGGTTTCCGAGCTGGCATGGTCGTTGGGGGAGATGAGGAGAATTCGGGCAGGAGATAGCAATGTGCAATACGAGGGCAACCTGGAAGCGTGGCTTAGTGCAGCACTGAGCAACCAAGACACATGCCTTGAAGGGTTTGAAGGCACAGACAGACGCCTCGAGAGTTACATCAGTGGAAGCCTGACACAAGTCACACAACTCATCAGCAATGTTTTGTCCTTGTACACTCAGTTGCATACCTTACCCTTTAAGCCTCCAAGAAACACCACTGCTGCTACTCCAACAACTGAATCTGATGGAACCTCAGAGTTTCCTGAATGGATGAGTGAGGATGATCAAGAGTTGCTCAGAGCCAAGCCAGGTGTGCGTGCGGACGCGGTTGTGGCTTTGGATGGTACTGGTCATTATCGCTCCATCGCCGAAGCTGTTAATGCAGCTCCGAGTCATAGTCCAAGGAGGTATGTTATTTACGTGAAAAAGGGACTTTACAAGGAGAATGTTGACATGAAGAAGAAGATGACCAACATCATGCTCGTAGGAGATGGTATTGGCCAAACCATTATCACTAGCAACCGGAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACGCTTGCTGTATCTGGGAAGGGTTTCATTGCAAGGGACATGTCGTTCCGGAACACAGCTGGGCCAGTGAACCATCAAGCGGTGGCACTGCGTGTGGATTCAGACCAATCAGCCTTCTACAGGTGCAGCGTGGAAGGGCACCAAGACACCCTCTACGCCCACTCCCTGCGACAGTTCTACCGTGAGTGCGAAATCTATGGCACCATAGACTTCATTTTCGGCAATGGAGCTGCAGTGCTGCAAAACTGCAAAATATACACCAGGGTCCCACTTCCCTTGCAGAAGGTTACCATCACGGCCCAAGGCAGAAAAAGCCCACACCAGACCACGGGCTTCACCATCCAAGACAGCTTTGTTCTCGCCACCCAGCCCACCTACTTGGGCCGGCCCTGGAAACAATACTCCCGGACAGTTTACATTAACACTTACATGAGTGGGCTTGTTCAGCCCCGAGGCTGGCTTGAGTGGTTCGGAAACTTTGCCCTGAATACTTTGTGGTACGGTGAGTACAGAAATTATGGGCCTGGTGCATCGATGGCGGGCCGGGTCAGATGGCCCGGTTATCATGTAATTAAAGATGCTTCCACCGCTAGTTTTTTCACTGTTCAGAGGTTCATTAATGGTGACACGTGGCTTCCACGGACAGGTGTCAAGTTTACAGCAGGTCTCACCAATTGA 1629 0.4997 MAMISFLFILMFLPSFQALSYEPIPSEIQTQDMQALIAQACMDIENQNSCLTNIHNELTKIGPPSPTSVMSAALKATLNEAVMAIDNMTKITTFSVSYREQQAIEDCKELLDFSVSELAWSLGEMRRIRAGDSNVQYEGNLEAWLSAALSNQDTCLEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLHTLPFKPPRNTTAATPTTESDGTSEFPEWMSEDDQELLRAKPGVRADAVVALDGTGHYRSIAEAVNAAPSHSPRRYVIYVKKGLYKENVDMKKKMTNIMLVGDGIGQTIITSNRNFMQGWTTFRTATLAVSGKGFIARDMSFRNTAGPVNHQAVALRVDSDQSAFYRCSVEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQTTGFTIQDSFVLATQPTYLGRPWKQYSRTVYINTYMSGLVQPRGWLEWFGNFALNTLWYGEYRNYGPGASMAGRVRWPGYHVIKDASTASFFTVQRFINGDTWLPRTGVKFTAGLTN* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01231 542 FunFam Pectinesterase 34 193 - -
Phac6g01231 542 SMART PMEI_2 32 187 IPR006501 GO:0004857
Phac6g01231 542 NCBIfam pectinesterase inhibitor domain 4 192 IPR006501 GO:0004857
Phac6g01231 542 CDD PMEI-like_3 49 193 - -
Phac6g01231 542 Pfam Plant invertase/pectin methylesterase inhibitor 36 187 IPR006501 GO:0004857
Phac6g01231 542 SUPERFAMILY Pectin lyase-like 235 539 IPR011050 -
Phac6g01231 542 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 192 IPR035513 -
Phac6g01231 542 FunFam Pectinesterase 232 540 - -
Phac6g01231 542 MobiDBLite consensus disorder prediction 198 218 - -
Phac6g01231 542 ProSitePatterns Pectinesterase signature 2. 382 391 IPR033131 -
Phac6g01231 542 PANTHER PECTINESTERASE 12 530 - -
Phac6g01231 542 Gene3D - 233 540 IPR012334 -
Phac6g01231 542 Coils Coil 542 542 - -
Phac6g01231 542 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 191 IPR035513 -
Phac6g01231 542 MobiDBLite consensus disorder prediction 198 216 - -
Phac6g01231 542 Pfam Pectinesterase 238 526 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01231 Phac-Chr6 15669513 15671643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01231 4 542 Carbohydrate Esterase AT3G05620 63.225 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01231 K01051 - gmx:100810565 991.104