Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01225 ATGCCGCCACGTCCAACTCCCTTCTTCATCGTCTTTCTATGTTTTCTCAATGCCTGTTCTTCGGTCTTCGCCACCCAATTTGACTTTGGAACCTTAACCATGAGCACATTGAAGCTTCTCGGCGATGCCCATTTGAACAACAACACCATCAGCCTCACCGGAGATCCCGCCGTCCCAAACTCCGCTGCTGGCAGAGCGCTTTACTCCGCTCCCGTCAGATTCCGGCTACCGGGGTCCCTTTCTCCGGCGAGCTTCGCCACCTTCTTCTCCTTCTCCGTCACCAACCTCAATCCCTCCTCTGTCGGCGGCGGCCTTGCCTTCGTCATCTCGCCGGACTCCACCGATGTCGGCGATTCCGGCGGCTTGCTCGGTCTGCAAAACCCCGCCGCCGCCACAGGCGATGGCGGCGGGTTCGTCGCTGTTGAATTCGACACCCTGATGGACGTGGAATTCAGCGACATTAATGGAAACCATGTGGGGTTGGACTTAAACAGCGTTGTTTCGGCTCAAGTTAGCGACTTGGGAAGCGTTGGAGTGGATCTCAAAAGCGGTGACTCGGTGAACGCGTGGATCGAGTACGATGGAAGCAGCAAAGGGTTGCGCGTGTGGGTCTCGTACTCGACTGTGAGGCCGAAAGATCCGATTTTGAAGGTGGATCTCGATGTGGGTATGTATGTTAATGATTTCATGTATGTGGGGTTTTCTGGGTCTACCCAAGGTAGCACCGAGGTGCACAGTGTTGAGTGGTGGAGTTTCAATTCCTCTTTCGATTCCGCCGCGGCTCCTGCCACAACGTCAGCACCCTCCGCCACGTCAGCACCTGAGCAGAAGGAGAGTAAGTCTTCTAGGAAGGGTACTGTGGGGGCTGTTGCTGGGGTTGTGACTGCTGGTGCTTTTGTTCTTGCTCTCTTTGCTGGTGCATTGATTTGGGTGTATTCTAAGAAGGTGAAGCGAATGAAGAAATTTGATCACTCTATTGAGTCGGAGATTATTAGAATGCCTAAGGAGTTTAGCTACAAGGAGCTGAAATTTGCCACTAAGGGGTTCAGTGCTAATAGGGTCATTGGTCATGGTGCTTTTGGGACTGTGTACAAGGGTGTGATGCCTGAGGGTGACACTGTTGCGGTGAAAAGGTGTAACCATAGTGGCCAAGGTAAGAGTGAGTTTTTGTCTGAGTTGTCTATAATTGGGAGTCTTAGGCATCGGAATTTGGTTCACCTTCAAGGTTGGTGCCACGAGAAAGGTGAGATTTTGTTGGTGTATGACTTGATGCCCAATGGGAGTTTAGATAAGGCTTTGTATGAGGCTAGGATGCCATTGTCATGGCCTCAGAGGCTCAAAATTTTGTTAGGTGTGTCATCTGTGTTGGCCTACTTGCATCACGAATGTGAAAACCAGGTAATCCATAGGGACATTAAGACTAGTAACATTATGTTAGATGAAGGGTTCAATGCTCGTACTTCTCACCTCTTGTTGAGCTTGCAAGACAGTGAATCTGACTGTAATAATGCTATGATCACCATCTCTACCTCTTCCTCAGAGAACAGCCTCAGTGGCAGACATATAGTCTGA 1572 0.5045 MPPRPTPFFIVFLCFLNACSSVFATQFDFGTLTMSTLKLLGDAHLNNNTISLTGDPAVPNSAAGRALYSAPVRFRLPGSLSPASFATFFSFSVTNLNPSSVGGGLAFVISPDSTDVGDSGGLLGLQNPAAATGDGGGFVAVEFDTLMDVEFSDINGNHVGLDLNSVVSAQVSDLGSVGVDLKSGDSVNAWIEYDGSSKGLRVWVSYSTVRPKDPILKVDLDVGMYVNDFMYVGFSGSTQGSTEVHSVEWWSFNSSFDSAAAPATTSAPSATSAPEQKESKSSRKGTVGAVAGVVTAGAFVLALFAGALIWVYSKKVKRMKKFDHSIESEIIRMPKEFSYKELKFATKGFSANRVIGHGAFGTVYKGVMPEGDTVAVKRCNHSGQGKSEFLSELSIIGSLRHRNLVHLQGWCHEKGEILLVYDLMPNGSLDKALYEARMPLSWPQRLKILLGVSSVLAYLHHECENQVIHRDIKTSNIMLDEGFNARTSHLLLSLQDSESDCNNAMITISTSSSENSLSGRHIV* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01225 523 CDD lectin_legume_LecRK_Arcelin_ConA 25 256 IPR001220 GO:0030246
Phac6g01225 523 Gene3D Transferase(Phosphotransferase) domain 1 424 518 - -
Phac6g01225 523 Pfam Protein kinase domain 351 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01225 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Phac6g01225 523 FunFam L-type lectin-domain containing receptor kinase VIII.1 312 423 - -
Phac6g01225 523 Gene3D - 23 268 - -
Phac6g01225 523 SUPERFAMILY Protein kinase-like (PK-like) 323 485 IPR011009 -
Phac6g01225 523 ProSiteProfiles Protein kinase domain profile. 349 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01225 523 Gene3D Phosphorylase Kinase; domain 1 310 423 - -
Phac6g01225 523 PANTHER - 47 489 - -
Phac6g01225 523 FunFam L-type lectin-domain containing receptor kinase VIII.1 23 266 - -
Phac6g01225 523 Pfam Legume lectin domain 25 264 IPR001220 GO:0030246
Phac6g01225 523 ProSitePatterns Legume lectins beta-chain signature. 139 145 IPR019825 -
Phac6g01225 523 MobiDBLite consensus disorder prediction 263 284 - -
Phac6g01225 523 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 257 IPR013320 -
Phac6g01225 523 SMART serkin_6 349 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01225 523 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01225 Phac-Chr6 15648550 15650583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01225 1 520 Receptor kinase-like Gene Family AT5G03140 58.228 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phac6g01225 Lectin_legB 1.1e-58 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01225 - - var:108341139 884.789