Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01213 ATGAATATGGCTCCTGTTTCACTGCCTCCTGGGTTTAGGTTCCACCCCACAGATGAAGAACTTGTTTCTTATTACCTCAGAAGAAAGATAAATGGTCGTAAGATCGAACTAGAGATCATCCCTGAAGTTGATCTTTATAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGAAAAGATTTGGAGTGGTATTTCTTCAGCCCTCGAGATAGAAAATACCCAAATGGATCAAGAACAAATCGTGCAACCAAATCTGGGTACTGGAAAGCTACAGGGAAAGACCGTAAGGTGAATTCTCAGAATTGTGCTATAGGAATGAAGAAAACCCTAGTTTACTATCGAGGTAGGGCACCACATGGTTGTCGCACAGGTTGGGTTATGCATGAGTACCGTCTTGATGAGACACAGTGTGAAACCAATACAGGCTTGCAGGATGCATATGCTCTTTGTCGTGTGTTCAAGAAGACTGCAGTGATTCCTCCAAAAGTTGGAGATCAACACTATGTGAATATCAGCACCAGCCATGCAAATCAGATAATTGCAAGTGATCAATCATCAAGCATTAACGAGCTATACTCTGAAGGTAGAGGTGAAGTTTTAGAGAGCTCAAATTATTTTATGTCAATGGATACATGCCCATCCCCAAACATAAATGGAACTGCTTTCAATATCAATGGTGGAAGAAGGGATAATGAGACAACATGGTCACATTTCTTATCAGAAGACTTGCTCAATCTTCCAACAACATCCACTTCTTCATTTCCCAATTATGGATCCATGAGCTATCCTCCATCAAAGGTGGATGTAGCACTGGAGTGTGCAAGGATGCAACATAGGTTTAGCATGCCTCCATTGCAGATGCAGGACTTGGACTTCCCTCAAGTTGGCATTTCCAAGCTGAAGATGGCACAAGGGTCGAGTTCCATGAGTGGAAGCAGAAATGAAACAGATATCTTGCAGGAAATTCTTTCAGTTGCTCATGCTTCGCAGGAGTTAATAAATCAATCCAACTACTCATCACAACCATTCATGAATGCCAATGAAAATTATGCTCCTCATGAAACTGACTTTACTTTTATGGTTGGTACCAATTACAATCATGTCAACGATATGAACCCCATGACCATGGGATTTGTTGACAAAGCATGGGAAGACCAAAACACAAGATCAATTGAGATTGGAGATCTTGATGATGGATTCAAGACGGAGAGGATGATGGAGAATTTAAGATGGGTGGGAATGTCCAGCAAAAATGTGGAAAAGAGCTTTATGGAAGAGCAGCAAAATATTGTTCCAATTGATGATATCTCAAACTTCCAAACTAATACAGAAGAAAACGAACTGAAAGGATTTGAGAAACACGGTTGCAACAAAGAAATAACCGATACTGAGATTGATGATTTTTCAATGGGATTCATGAATGATGAAGACCCCAATGAGAACTTCCTAAATGAGGAAAACATTGACTATTCAAATTCTACAAACTATGATGTTGTTGAGGAAACAAAAACCAATCATGGGATGTTTGTCTCAACTCATCAAGTAGCTGATACATTCTTTCATCAAATAGCTCCTTCACAAACCGTCAAAGTTCAACTCAATCCAGTAATGGCTGGCAATCAATGTGTAGAGAAAGCAACAGTCAAGAAAGGACCCTCTTTCTTTAGAAAGTTTAAGGCCTGTGTGACAGGGAAGCTAATAAAGCCATCAAACACAGTAGCAAGTGTTCTTGAATTCATCTTTGCATTTTTGTTGATGCATTGTGTTTTTTTAAAGGAATTGGTGGAAGATTGGAAACCAGACCTTAAACGTTGTGGCTGTGTTTACACCATGAAGAATATGGGAGAAGCAGAAGAGAGTGTGACCAGGAATGAACAAGAAAAGGTTTGGTTTGTTGGTATCAGATATGGGAAAGGATTTAGCATGGTCCTAAAGAAGATAAGCATTTTCCTCACTATATCATTGGCTCTGTTTACCATGTGGGCTAACCATATCATAGTTGACTCTTAG 2019 0.3997 MNMAPVSLPPGFRFHPTDEELVSYYLRRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQNCAIGMKKTLVYYRGRAPHGCRTGWVMHEYRLDETQCETNTGLQDAYALCRVFKKTAVIPPKVGDQHYVNISTSHANQIIASDQSSSINELYSEGRGEVLESSNYFMSMDTCPSPNINGTAFNINGGRRDNETTWSHFLSEDLLNLPTTSTSSFPNYGSMSYPPSKVDVALECARMQHRFSMPPLQMQDLDFPQVGISKLKMAQGSSSMSGSRNETDILQEILSVAHASQELINQSNYSSQPFMNANENYAPHETDFTFMVGTNYNHVNDMNPMTMGFVDKAWEDQNTRSIEIGDLDDGFKTERMMENLRWVGMSSKNVEKSFMEEQQNIVPIDDISNFQTNTEENELKGFEKHGCNKEITDTEIDDFSMGFMNDEDPNENFLNEENIDYSNSTNYDVVEETKTNHGMFVSTHQVADTFFHQIAPSQTVKVQLNPVMAGNQCVEKATVKKGPSFFRKFKACVTGKLIKPSNTVASVLEFIFAFLLMHCVFLKELVEDWKPDLKRCGCVYTMKNMGEAEESVTRNEQEKVWFVGIRYGKGFSMVLKKISIFLTISLALFTMWANHIIVDS* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01213 672 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Phac6g01213 672 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Phac6g01213 672 FunFam Nac domain-containing protein 86 17 161 - -
Phac6g01213 672 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Phac6g01213 672 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Phac6g01213 672 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01213 Phac-Chr6 15591777 15596497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01213 3 663 NAC Transcription Factor Family AT1G65910 43.440 1.69e-164 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac6g01213 NAM 2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01213 - - gsj:114381841 1045.8