Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01212 ATGAATATGGCTCCTGTTTCACTGCCTCCTGGGTTTAGGTTCCACCCCACAGATGAAGAACTTGTTTCTTATTACCTCAGAAGAAAGATAAATGGTCGTAAGATCGAACTAGAGATCATCCCTGAAGTTGATCTTTATAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGAAAAGATTTGGAGTGGTATTTCTTCAGCCCTCGAGATAGAAAATACCCAAATGGATCAAGAACAAATCGTGCAACCAAATCTGGGTACTGGAAAGCTACAGGGAAAGACCGTAAGGTGAATTCTCAGAATTGTGCTATAGGAATGAAGAAAACCCTAGTTTACTATCGAGGTAGGGCACCACATGGTTGTCGCACAGGTTGGGTTATGCATGAGTACCGTCTTGATGAGACACAGTGTGAAACCAATACAGGCTTGCAGGATGCATATGCTCTTTGTCGTGTGTTCAAGAAGACTGCAGTGATTCCTCCAAAAGTTGGAGATCAACACTATGTGAATATCAGCACCAGCCATGCAAATCAGATAATTGCAAGTGATCAATCATCAAGCATTAACGAGCTATACTCTGAAGGTAGAGGTGAAGTTTTAGAGAGCTCAAATTATTTTATGTCAATGGATACATGCCCATCCCCAAACATAAATGGAACTGCTTTCAATATCAATGGTGGAAGAAGGGATAATGAGACAACATGGTCACATTTCTTATCAGAAGACTTGCTCAATCTTCCAACAACATCCACTTCTTCATTTCCCAATTATGGATCCATGAGCTATCCTCCATCAAAGGTGGATGTAGCACTGGAGTGTGCAAGGATGCAACATAGGTTTAGCATGCCTCCATTGCAGATGCAGGACTTGGACTTCCCTCAAGTTGGCATTTCCAAGCTGAAGATGGCACAAGGGTCGAGTTCCATGAGTGGAAGCAGAAATGAAACAGATATCTTGCAGGAAATTCTTTCAGTTGCTCATGCTTCGCAGGAGTTAATAAATCAATCCAACTACTCATCACAACCATTCATGAATGCCAATGAAAATTATGCTCCTCATGAAACTGACTTTACTTTTATGGTTGGTACCAATTACAATCATGTCAACGATATGAACCCCATGACCATGGGATTTGTTGACAAAGCATGGGAAGACCAAAACACAAGATCAATTGAGATTGGAGATCTTGATGATGGATTCAAGACGGAGAGGATGATGGAGAATTTAAGATGGGTGGGAATGTCCAGCAAAAATGTGGAAAAGAGCTTTATGGAAGAGCAGCAAAATATTGTTCCAATTGATGATATCTCAAACTTCCAAACTAATACAGAAGAAAACGAACTGAAAGTAGGATTTGAGAAACACGGTTGCAACAAAGAAATAACCGATACTGAGATTGATGATTTTTCAATGGGATTCATGAATGATGAAGACCCCAATGAGAACTTCCTAAATGAGGAAAACATTGACTATTCAAATTCTACAAACTATGATGTTGTTGAGGAAACAAAAACCAATCATGGGATGTTTGTCTCAACTCATCAAGTAGCTGATACATTCTTTCATCAAATAGCTCCTTCACAAACCGTCAAAGTTCAACTCAATCCAGTAATGGCTGGCAATCAATGTGTAGAGAAAGCAACAGTCAAGAAAGGACCCTCTTTCTTTAGAAAGTTTAAGGCCTGTGTGACAGGGAAGCTAATAAAGCCATCAAACACAGTAGCAAGTGTTCTTGAATTCATCTTTGCATTTTTGTTGATGCATTGTGTTTTTTTAAAGGAATTGGTGGAAGATTGGAAACCAGACCTTAAACGTTGTGGCTGTGTTTACACCATGAAGAATATGGGAGAAGCAGAAGAGAGTGTGACCAGGAATGAACAAGAAAAGGTTTGGTTTGTTGGTATCAGATATGGGAAAGGATTTAGCATGGTCCTAAAGAAGATAAGCATTTTCCTCACTATATCATTGGCTCTGTTTACCATGTGGGCTAACCATATCATAGTTGACTCTTAG 2022 0.3996 MNMAPVSLPPGFRFHPTDEELVSYYLRRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQNCAIGMKKTLVYYRGRAPHGCRTGWVMHEYRLDETQCETNTGLQDAYALCRVFKKTAVIPPKVGDQHYVNISTSHANQIIASDQSSSINELYSEGRGEVLESSNYFMSMDTCPSPNINGTAFNINGGRRDNETTWSHFLSEDLLNLPTTSTSSFPNYGSMSYPPSKVDVALECARMQHRFSMPPLQMQDLDFPQVGISKLKMAQGSSSMSGSRNETDILQEILSVAHASQELINQSNYSSQPFMNANENYAPHETDFTFMVGTNYNHVNDMNPMTMGFVDKAWEDQNTRSIEIGDLDDGFKTERMMENLRWVGMSSKNVEKSFMEEQQNIVPIDDISNFQTNTEENELKVGFEKHGCNKEITDTEIDDFSMGFMNDEDPNENFLNEENIDYSNSTNYDVVEETKTNHGMFVSTHQVADTFFHQIAPSQTVKVQLNPVMAGNQCVEKATVKKGPSFFRKFKACVTGKLIKPSNTVASVLEFIFAFLLMHCVFLKELVEDWKPDLKRCGCVYTMKNMGEAEESVTRNEQEKVWFVGIRYGKGFSMVLKKISIFLTISLALFTMWANHIIVDS* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01212 673 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Phac6g01212 673 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 305 - -
Phac6g01212 673 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Phac6g01212 673 FunFam Nac domain-containing protein 86 17 161 - -
Phac6g01212 673 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Phac6g01212 673 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01212 Phac-Chr6 15591777 15596497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01212 3 664 NAC Transcription Factor Family AT1G65910 43.377 2.87e-164 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac6g01212 NAM 2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01212 - - gsj:114381841 1051.58