Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01207 ATGGCGATTCGAGATCAAAGTGAATTCAACAGATCACCGGGTGGTCCTTCAGTAGGAAGTGGTGTATCTTTGAGTTCTGGAGTGCATTCTGTTACTCATATTCAACTAAATGAACAGTTTTCTTGTGGGAGTGACTATGCTCTGAAGGTAAGGAAACCATATACTATCACAAAACAGAGAGAGAGGTGGACAGATGAAGAACATAAGAAGTTCCTTGAAGCTTTAAAGCTGCATGGTCGGGCTTGGCGGCGTATTGAAGAACATGTTGGCACAAAGACTGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTCTTCGCGACCCTACTGGGAGTGTTACAAATACAGCGGATTCAATTGAAATTCCTCCTCCAAGACCAAAACGAAAGCCAATGCATCCTTACCCTCGTAAGCTAGTTGAGACTCCTAATAAAGAAACTTCAATCCCAGAACAACTTATGAAGTCTAGTTCTCTGAAGTCATCAGATTTTGATCAAGAAAACCAATCTCCGAAATCAGTATTATCAGGAGCTGGTTCAGACAGCCTTAGCTCCTCAGATTCAGATACACCAAATGAAAGTTTGTCCCCCATGTCATCCATCAGTGACATCCATACAAGTGATTTTACTTGTGCCGAGCCCAACACAACAACAGAAGAATCTTCCGGCCAGACTTTCAAACTCTTTGGGATTACACTTTTTGTAACAGATCCATGCAAACCCTCTTCTCCAACAATTGAAGCATGCAAACCAATACCTTTAAACATCCGCAAGGGGGATGGAAGATTGGAACTTCTTGGCCACATGACACCAAGTGAAACATCAGCCATATCCCTGCTAAAGGTGAGAGTGGGTCCTGAAGCATGTGGGAAAGGGTTTGTGCCATATGAAAGGTGCATGGCAGGGAGAGAAAACCAGTCTTCATCTGTGACAAATGATAATAGAGAAGAGCAATACATCCACCTTTCCTTGTAG 984 0.4278 MAIRDQSEFNRSPGGPSVGSGVSLSSGVHSVTHIQLNEQFSCGSDYALKVRKPYTITKQRERWTDEEHKKFLEALKLHGRAWRRIEEHVGTKTAVQIRSHAQKFFSKVLRDPTGSVTNTADSIEIPPPRPKRKPMHPYPRKLVETPNKETSIPEQLMKSSSLKSSDFDQENQSPKSVLSGAGSDSLSSSDSDTPNESLSPMSSISDIHTSDFTCAEPNTTTEESSGQTFKLFGITLFVTDPCKPSSPTIEACKPIPLNIRKGDGRLELLGHMTPSETSAISLLKVRVGPEACGKGFVPYERCMAGRENQSSSVTNDNREEQYIHLSL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01207 327 ProSiteProfiles SANT domain profile. 58 109 IPR017884 -
Phac6g01207 327 MobiDBLite consensus disorder prediction 148 205 - -
Phac6g01207 327 PANTHER SWI/SNF COMPLEX-RELATED 45 234 - -
Phac6g01207 327 MobiDBLite consensus disorder prediction 10 24 - -
Phac6g01207 327 MobiDBLite consensus disorder prediction 126 143 - -
Phac6g01207 327 SMART sant 59 107 IPR001005 -
Phac6g01207 327 MobiDBLite consensus disorder prediction 1 24 - -
Phac6g01207 327 NCBIfam myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Phac6g01207 327 SUPERFAMILY Homeodomain-like 54 107 IPR009057 -
Phac6g01207 327 FunFam protein REVEILLE 6 isoform X1 62 110 - -
Phac6g01207 327 Pfam Myb-like DNA-binding domain 60 103 IPR001005 -
Phac6g01207 327 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Phac6g01207 327 Gene3D - 62 108 - -
Phac6g01207 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Phac6g01207 327 CDD SANT 62 105 IPR001005 -
Phac6g01207 327 MobiDBLite consensus disorder prediction 115 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01207 Phac-Chr6 15554963 15558014 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac6g01207 Myb_DNA-binding 5.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01207 - - gmx:780539 456.832