Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac6g01207 | ATGGCGATTCGAGATCAAAGTGAATTCAACAGATCACCGGGTGGTCCTTCAGTAGGAAGTGGTGTATCTTTGAGTTCTGGAGTGCATTCTGTTACTCATATTCAACTAAATGAACAGTTTTCTTGTGGGAGTGACTATGCTCTGAAGGTAAGGAAACCATATACTATCACAAAACAGAGAGAGAGGTGGACAGATGAAGAACATAAGAAGTTCCTTGAAGCTTTAAAGCTGCATGGTCGGGCTTGGCGGCGTATTGAAGAACATGTTGGCACAAAGACTGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTCTTCGCGACCCTACTGGGAGTGTTACAAATACAGCGGATTCAATTGAAATTCCTCCTCCAAGACCAAAACGAAAGCCAATGCATCCTTACCCTCGTAAGCTAGTTGAGACTCCTAATAAAGAAACTTCAATCCCAGAACAACTTATGAAGTCTAGTTCTCTGAAGTCATCAGATTTTGATCAAGAAAACCAATCTCCGAAATCAGTATTATCAGGAGCTGGTTCAGACAGCCTTAGCTCCTCAGATTCAGATACACCAAATGAAAGTTTGTCCCCCATGTCATCCATCAGTGACATCCATACAAGTGATTTTACTTGTGCCGAGCCCAACACAACAACAGAAGAATCTTCCGGCCAGACTTTCAAACTCTTTGGGATTACACTTTTTGTAACAGATCCATGCAAACCCTCTTCTCCAACAATTGAAGCATGCAAACCAATACCTTTAAACATCCGCAAGGGGGATGGAAGATTGGAACTTCTTGGCCACATGACACCAAGTGAAACATCAGCCATATCCCTGCTAAAGGTGAGAGTGGGTCCTGAAGCATGTGGGAAAGGGTTTGTGCCATATGAAAGGTGCATGGCAGGGAGAGAAAACCAGTCTTCATCTGTGACAAATGATAATAGAGAAGAGCAATACATCCACCTTTCCTTGTAG | 984 | 0.4278 | MAIRDQSEFNRSPGGPSVGSGVSLSSGVHSVTHIQLNEQFSCGSDYALKVRKPYTITKQRERWTDEEHKKFLEALKLHGRAWRRIEEHVGTKTAVQIRSHAQKFFSKVLRDPTGSVTNTADSIEIPPPRPKRKPMHPYPRKLVETPNKETSIPEQLMKSSSLKSSDFDQENQSPKSVLSGAGSDSLSSSDSDTPNESLSPMSSISDIHTSDFTCAEPNTTTEESSGQTFKLFGITLFVTDPCKPSSPTIEACKPIPLNIRKGDGRLELLGHMTPSETSAISLLKVRVGPEACGKGFVPYERCMAGRENQSSSVTNDNREEQYIHLSL* | 328 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac6g01207 | 327 | ProSiteProfiles | SANT domain profile. | 58 | 109 | IPR017884 | - | |
Phac6g01207 | 327 | MobiDBLite | consensus disorder prediction | 148 | 205 | - | - | |
Phac6g01207 | 327 | PANTHER | SWI/SNF COMPLEX-RELATED | 45 | 234 | - | - | |
Phac6g01207 | 327 | MobiDBLite | consensus disorder prediction | 10 | 24 | - | - | |
Phac6g01207 | 327 | MobiDBLite | consensus disorder prediction | 126 | 143 | - | - | |
Phac6g01207 | 327 | SMART | sant | 59 | 107 | IPR001005 | - | |
Phac6g01207 | 327 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Phac6g01207 | 327 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 58 | 107 | IPR006447 | GO:0003677 | |
Phac6g01207 | 327 | SUPERFAMILY | Homeodomain-like | 54 | 107 | IPR009057 | - | |
Phac6g01207 | 327 | FunFam | protein REVEILLE 6 isoform X1 | 62 | 110 | - | - | |
Phac6g01207 | 327 | Pfam | Myb-like DNA-binding domain | 60 | 103 | IPR001005 | - | |
Phac6g01207 | 327 | ProSiteProfiles | Myb-like domain profile. | 55 | 105 | IPR001005 | - | |
Phac6g01207 | 327 | Gene3D | - | 62 | 108 | - | - | |
Phac6g01207 | 327 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 55 | 109 | IPR017930 | - | |
Phac6g01207 | 327 | CDD | SANT | 62 | 105 | IPR001005 | - | |
Phac6g01207 | 327 | MobiDBLite | consensus disorder prediction | 115 | 205 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac6g01207 | Phac-Chr6 | 15554963 | 15558014 | Dispersed/Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Phac6g01207 | Myb_DNA-binding | 5.2e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac6g01207 | - | - | gmx:780539 | 456.832 |