Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01172 ATGTTTGAACTAAAGCTAATTGTCTTAACAATGATGTTGTGGAGCAGTAATACTGTAGAACATGGTGCAGCGGGTGATCCACAGACACGCATGATAAACAGTGGATGCAGCACATACAACGCTAGCAACGTGCAGAGTTTCCATGCCAATATCAACGCAACATTTTCAAAGCTTAGAGGAGATATTAAGAACGACAGCAAGCACTTTGGCACAGCACAGCAAGCCATACGAGATGTTCTCACCTTTGCTATGTTTCAATGCAGAAACTATCTCTCCAAAAATGATTGTCTTTCTTGCTTCGACACCGCCTCAACCCAAATCCGCAACTGCTCCGCCGCCAACGCCAACGGCGCCAGAGTCATCTACGACGGTTGCTTCCTCAGGTATGAGAGCGAGAGGTTCTTCGATCAGACCAATGAACTTGGCAATGGTGTATCATGTGGAAACATCACTTCAAATGCCACTGGTTTTAGATTAGTTGGAGAACAAGTTATTTGGGATATCCATACAGCAACACCAAAAACCAAAAGGTTTTATGCAGCTACTAAGACAGAGGTGGCTGGTAGTGGTGCAATTTATGCTGTTGCACAGTGTGTTGAAACTGCAACTGCTGATAAATGTCTGAGTTGCATGCAAGTTGGATACAACAACTTACAAAGTTGTCTTCCTAACACAGAGGGTAGAGCATATGATGCTGGATGTTTCATGAGATACTCCACCACACCTTTCTTTGCTGATAATCAGACCATTGATATTGCACCCTTTTTAAAACAAGGAGATTCAAGCAAGAAGTGGGCAATAATCGGTGGCAGTGTTGGAGGATTTGTTGTTCTCCTCTGTGTGTTGTTTGCATGGCGATGGTTTACAAAACCAAAGAGGGTTCCTAGAGGTGACATATTGGGAGCAACAGAGTTGAAAGGTCCAGTTAACTACAAGTATAATGATTTGAAAGCTGCAACCAAAAAATTCAGTGCTGAAAACAAACTTGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCCGTAAAAAAACTAGTTTTGGGGAAATCAAGCAAGATGGAGGATGATTTTGAAGGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTAGACTTCTTGGTTGTTGCAGCAAAGGTCAAGAGAGAATCTTGGTTTATGAGTATATGGCAAATAGCAGTCTTGACAAATTCTTGTTCGGTAATAGAAAAGGTTCCCTCAGTTGGAAACAACGCTATGATATAGTTTTAGGCACAGCAAGGGGACTGGCATATCTACATGAGGAATTCCACGTGTCCATCATACATAGAGATATCAAGACTTCTAATATCCTCTTGGATGATGATCTCCAACCCAAAATTGCTGATTTTGGATTGGCAAGGCTTCTGCCAGAGGATCGTTCCCATCTTAGCACAAGATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATACATGGTCAATTATCTGAGAAGGCTGATACCTACAGTTATGGTATTGTAGTCCTAGAAATCATTAGTGGTCAAAAGAGTACTACTGTGAAGGGTGACGAGGATGGTCATGAATACCTACTTCAACGAACATGGAAACTGTATGAGAGAGGCATGCACTTAGAGCTGGTGGACAAGGCCATAGAGCCAAATGAGTATGATGCAGAAGATGTTAAGAAAATTATAGAAATTGCACTATTATGTACTCAGGCATCAGCTGCAACGAGACCAACAATGTCTGAAATAGTAGTGCTACTCAAAAGCAAGAGCTTAGTGGAGCACCTGCGACCAACTATGCCTGTGTTTGTTGAAACGAATATGAAGACTCGGGAAAGCAAGTCTAGCTCAACCAGTGGCTCTTCATCTAATGCCACTGCCTCAATTTCTGTTCTATCAGCACGGTGA 1932 0.4208 MFELKLIVLTMMLWSSNTVEHGAAGDPQTRMINSGCSTYNASNVQSFHANINATFSKLRGDIKNDSKHFGTAQQAIRDVLTFAMFQCRNYLSKNDCLSCFDTASTQIRNCSAANANGARVIYDGCFLRYESERFFDQTNELGNGVSCGNITSNATGFRLVGEQVIWDIHTATPKTKRFYAATKTEVAGSGAIYAVAQCVETATADKCLSCMQVGYNNLQSCLPNTEGRAYDAGCFMRYSTTPFFADNQTIDIAPFLKQGDSSKKWAIIGGSVGGFVVLLCVLFAWRWFTKPKRVPRGDILGATELKGPVNYKYNDLKAATKKFSAENKLGEGGFGDVYKGTLKNGKVVAVKKLVLGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDKFLFGNRKGSLSWKQRYDIVLGTARGLAYLHEEFHVSIIHRDIKTSNILLDDDLQPKIADFGLARLLPEDRSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTTVKGDEDGHEYLLQRTWKLYERGMHLELVDKAIEPNEYDAEDVKKIIEIALLCTQASAATRPTMSEIVVLLKSKSLVEHLRPTMPVFVETNMKTRESKSSSTSGSSSNATASISVLSAR* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01172 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Phac6g01172 643 ProSiteProfiles Protein kinase domain profile. 323 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01172 643 MobiDBLite consensus disorder prediction 615 643 - -
Phac6g01172 643 Pfam Salt stress response/antifungal 155 240 IPR002902 -
Phac6g01172 643 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Phac6g01172 643 FunFam Cysteine-rich receptor-like protein kinase 2 290 399 - -
Phac6g01172 643 Pfam Protein kinase domain 324 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01172 643 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Phac6g01172 643 SMART serkin_6 323 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01172 643 Gene3D Transferase(Phosphotransferase) domain 1 400 614 - -
Phac6g01172 643 FunFam Cysteine-rich receptor-like protein kinase 2 142 243 - -
Phac6g01172 643 CDD STKc_IRAK 329 596 - -
Phac6g01172 643 ProSitePatterns Protein kinases ATP-binding region signature. 329 352 IPR017441 GO:0005524
Phac6g01172 643 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 83 631 - -
Phac6g01172 643 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Phac6g01172 643 Gene3D - 141 243 IPR038408 -
Phac6g01172 643 Gene3D - 28 134 IPR038408 -
Phac6g01172 643 FunFam Cysteine-rich receptor-like protein kinase 2 28 134 - -
Phac6g01172 643 FunFam Cysteine-rich receptor-like protein kinase 2 400 603 - -
Phac6g01172 643 Gene3D Phosphorylase Kinase; domain 1 299 399 - -
Phac6g01172 643 SUPERFAMILY Protein kinase-like (PK-like) 306 595 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01172 Phac-Chr6 15367793 15373506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01172 1 643 Receptor kinase-like Gene Family AT1G70520 36.446 1.61e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac6g01172 Pkinase 9.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01172 - - gmx:100801131 984.941