Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01169 ATGCTGCAACTTAAGGTGGTGGCCTTAATTTTGATATGGTGGAGCAGTAATGGTGTTGAAGATGCAGTTGCAGCCAAAGATGCACATTTAGTAAACATGGGGTGCAGCTCGTTCAATGCTTCCGATTTGAGAAGCTTCTTTGCGAATATCAATGAATCGTTTTCAGACATGAGAGAAGAGATTAGAAATCAAAGCAAACACTTTGGCACAGTACAGAAAGCCAGAGGAGAGGTCCTCACATACACTATGTTTCAGTGCAGAAACTATCTCTCCAAAAATGACTGTCTTTCTTGCTTCAACACTGCCACCACCCAGATCCGCAACTGCTCCGGTGGCAACGGTGCCAGAGTCATCTACGATAGCTGCTTCCTCAGGTATGAGAGCAACAGGTTCTACGATCAGACCAATGAAATTGGAAGTGGGGTATCATGTGGGAACATAAGTTCAACTGTTCCTGATTTTAAAGTTGCTGGAGAACAAGCCCTAATGGACCTCCAAACAGCAACACCGAAAACTAGAGATTTTTATGCAGCTACTAAGACACTGGTGGCTGGTGGTAGTGCGGTTTATGCTGTTGCACAGTGTGTTGAAACTGCCACTGCGATTAATTGTCAGAATTGCATGCAAGTTGGATACAACAACTTACAAAGTTGTCTTCCTAACACAGAGGGAAGAGCATATGATGCTGGCTGTTTTATGAGATACTCCACCACACCTTTCTTTGCTGATAATCAAACCATTGATATTGCACCCTATTTGAAAAAAGGAAATTCCAACAAGAAATGGGCTATAATAGGTGGTGTTGTTGGAGGGGTTGTTCTTCTCCTTCTGTTGTTTGCCTGGAGAATGTCAAGAAAAAGAAACAAGGTTCCCAGAGGTGACATATTGGGAGCAACAGAGTTGAAAGGTCCAGTTAACTACAAGTATAATGATTTGAAAGCTGCAACCAAAAATTTCAGTGCAGAAAACAAACTTGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCTGTAAAAAAACTAGTTTTTGGGAAATCAAGCAACATGGAGGATAATTTTGAAGGGGAAGTGAAGCTTATAAGTAATGTTCACCACCGAAATCTCGTTAGGCTTCTTGGCTGCTGCAGCAAAAGCCAAGAAAGAATCTTAGTTTATGAATACATGGCTAATAAAAGTCTTGACAAATTCTTATTCGGTAACAAAAAAGGTTCCCTCAATTGGAAACAACGCTCTGATATAATTTTAGGCACAGCAAGAGGACTGGCATATCTGCATGAGGAGTTCCACGTCTCCATCATACATAGAGATATCAAGACTGCTAATATCCTGTTAAATGATGATCTTCAGCCAAAAATTGCTGATTTTGGGTTGGCAAGGCTTCTCCCAGAGGATCGTTCTCATCTCAGCACAAAATTTGCAGGAACTTTGTAA 1455 0.4117 MLQLKVVALILIWWSSNGVEDAVAAKDAHLVNMGCSSFNASDLRSFFANINESFSDMREEIRNQSKHFGTVQKARGEVLTYTMFQCRNYLSKNDCLSCFNTATTQIRNCSGGNGARVIYDSCFLRYESNRFYDQTNEIGSGVSCGNISSTVPDFKVAGEQALMDLQTATPKTRDFYAATKTLVAGGSAVYAVAQCVETATAINCQNCMQVGYNNLQSCLPNTEGRAYDAGCFMRYSTTPFFADNQTIDIAPYLKKGNSNKKWAIIGGVVGGVVLLLLLFAWRMSRKRNKVPRGDILGATELKGPVNYKYNDLKAATKNFSAENKLGEGGFGDVYKGTLKNGKVVAVKKLVFGKSSNMEDNFEGEVKLISNVHHRNLVRLLGCCSKSQERILVYEYMANKSLDKFLFGNKKGSLNWKQRSDIILGTARGLAYLHEEFHVSIIHRDIKTANILLNDDLQPKIADFGLARLLPEDRSHLSTKFAGTL* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01169 484 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Phac6g01169 484 Gene3D Phosphorylase Kinase; domain 1 284 395 - -
Phac6g01169 484 Pfam Protein kinase domain 320 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01169 484 ProSitePatterns Protein kinases ATP-binding region signature. 325 348 IPR017441 GO:0005524
Phac6g01169 484 Pfam Salt stress response/antifungal 39 128 IPR002902 -
Phac6g01169 484 Pfam Salt stress response/antifungal 153 237 IPR002902 -
Phac6g01169 484 FunFam Cysteine-rich receptor-like protein kinase 2 27 131 - -
Phac6g01169 484 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 81 484 - -
Phac6g01169 484 FunFam Cysteine-rich receptor-like protein kinase 2 284 395 - -
Phac6g01169 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Phac6g01169 484 Gene3D Transferase(Phosphotransferase) domain 1 396 484 - -
Phac6g01169 484 Gene3D - 27 131 IPR038408 -
Phac6g01169 484 Gene3D - 141 240 IPR038408 -
Phac6g01169 484 SMART serkin_6 319 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01169 484 FunFam Os07g0541700 protein 396 483 - -
Phac6g01169 484 ProSiteProfiles Protein kinase domain profile. 319 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01169 484 SUPERFAMILY Protein kinase-like (PK-like) 302 483 IPR011009 -
Phac6g01169 484 ProSiteProfiles Gnk2-homologous domain profile. 135 240 IPR002902 -
Phac6g01169 484 FunFam Cysteine-rich receptor-like protein kinase 2 139 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01169 Phac-Chr6 15342917 15346265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01169 81 484 Receptor kinase-like Gene Family AT5G40380 41.162 2.47e-91 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac6g01169 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01169 - - gmx:100801131 774.622