Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01112 ATGAGAGCTGTGGGCCACAACAAGCAATTGCTGAGTTTGCAACTGTCTGGAACCTTGGCACCAGATCTTGGCAAATTAACGTACATGAAAAGATTGAACTTTATGTGGAACAACATAAGTGGCAGTATTCCAAAGGAAGTTGGCAATATCAAATCTTTGGAACTTTTGCTCCTGAATGGAAATAATTTAACAGGTCCACTACCAGTGGAGATTGGCTATCTTCCAAACCTTGATAGAATACAAATCGATCAGAACCATATATCAGGACCTATACCTACGTCATTTGCAAATCTGAACAAGACAAAGCATTTTCACATGAACAACAACTCACTCAGCGGGCAAATCCCACCAGAGCTTTCCCGATTACCGAAACTTGTTCACCTTCTTCTCGACAATAACAACTTATCTGGATATCTCCCCCCTGAGCTGTACAAGTTGCCAAATTTACTTATCATTCAACTTGATAACAATAATTTTGGAGGAAATAGTATTCCTGATACGTATGCCAACATGTCAAAGTTGTTGAAGATGAGCCTTAGGAATTGCAGCTTGCGAGGACCAGTTCCTGACTTAAGCAGGATACCTCGCCTTCTTTATCTCGACCTCAGTTTCAACCAGTTGAATGAATCGATTCCTCCCAATAAGCTTTCTGAAAATATTACAACCATTGATTTATCAAACAACCGCCTTACTGGAAATATTCCATCCTACTTTGATGATCTTCCACGTCTTCAGAAGTTGTCACTTGCAAACAATTCATTGAATGGCAGTGTTTCTTCCTCCATTTGGCTGAATAAGACTTCAAATGGATCAGAAAACTTTCTTTTGGAGTTGCAAAATAATAACCTTACAGCCATATCAGGAAGTACTGATCTTCCTCCAAATGTCACAGTTGTGCTTGATGAGAATCCCCTTTGCTCAAACACAACCCTTGTTCAGTTCTGTGGATCTGAAGGTGCTACTGTAACAAATGGCTCATTCACTACAAACTCCAGTTTCTGTCCCCCTCAAGGATGCCCTCCTCCTTATGAGTACTCTGTTAATTGTTTCTGTGCGCTTCCATTGCTTGTTGCCTATCGGCTGAAAAGTCCTGGATTTTCAGACTTTGCTCCATATTTGAATGAGTTTGAGACCTACATGACTACTGGTCTTCAATTATCTACTGATCAGCTAGAATATGATTTTTATTGGCAAGTAGGACCTCGATTGAGAATGGACTTGAAGTTTTTCCCTCTATATGTTAATAGCACTAGCAATCATACTTTCAATAGCAGTGAGCTCCTACGGATCACAAGCATGTTCACAGGATGGCTAATTGCAGACAGTGATCTGTTTGGACCTTATGAACTGATCGGCTTCAATCTTTTGGGTCCTTACAAGGATGAAATTGGAAAGCGTTCAAACTCAGGGATAAGCACAGGTGCACTGGTTGGCATAATTGTAGGGGCAATTGCTTGTGCAGTGACATTATCTGCAATTGTTACCCTTCTTATATTGAGAATCAAATTGAGAGGTTATCATACTGTTTCCAAGCGACGTCATGCATCTAGGATCTCTATAAAAATTGATGGTGTAAGGGCCTTTACTTATGGAGAATTGTCCTCCGCCACAAACAATTTCAGCATTTCTGCTCAAGTTGGACAAGGGGGCTATGGGAAGGTTTATAAAGGGACTCTTTCTGATGGCACAGTTGTTGCCATAAAACGTGCACAAGAGGGATCTCTGCAAGGTGAGAAGGAGTTCCTTACAGAAATATCATTACTATCAAGGTTACATCATCGCAACCTTGTTTCTCTAATTGGATACTGCGATGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGTCTAATGGCACATTGAGGGATCACCTTTCTGTTACAGCTAAAGAACCCCTGACTTTTGCCATGAGATTGAAGATCGCACTAGGGGCAGCTAAAGGTCTCATGTATCTGCACACAGAAGCTGATCCTCCAATATTTCACCGAGATGTAAAGGCCAGCAACATATTGTTGGACCCTAAGTTTTCGGCGAAAGTGGCTGATTTTGGACTTTCACGTCTTGCCCCAGTTCCAGATATGGAAGGAGTTGTGCCTGGTCATGTATCTACGGTTGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCACAAGTTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTTGTACTTCTGGAACTTTTGACTGGAATGCATCCTATCTCACACGGAAAAAATATTGTTAGAGAGGTTAATATTGCGTACCAAAGAGGTGTAATATTTTCAATTATTGATGGACGCATGGGGTCTTATCCATCTGAGCAAGTGGAGAAATTTTTGACATTGGCCTTGAAGTGTTGCGAAGATGAGCCAGAGGCTCGGCCTAGAATGGCAGAAGTGGTTAGAGAGCTTGAAAACATATGGTATACAATGCCAGAATCAGACACAAAGAGAGCTGAATTTATATCCAGTGATTCTGGCAAAACAGACAGTCACAGTATACCATCTTCATCCTCTGCTTCTGCTATGAAGACTCCTTTTGTATCAGGAGATGTGTCAGGTAGTGACCTTGTAAGTGGAGTAATACCAAGCATCAACCCAAGATAG 2622 0.413 MRAVGHNKQLLSLQLSGTLAPDLGKLTYMKRLNFMWNNISGSIPKEVGNIKSLELLLLNGNNLTGPLPVEIGYLPNLDRIQIDQNHISGPIPTSFANLNKTKHFHMNNNSLSGQIPPELSRLPKLVHLLLDNNNLSGYLPPELYKLPNLLIIQLDNNNFGGNSIPDTYANMSKLLKMSLRNCSLRGPVPDLSRIPRLLYLDLSFNQLNESIPPNKLSENITTIDLSNNRLTGNIPSYFDDLPRLQKLSLANNSLNGSVSSSIWLNKTSNGSENFLLELQNNNLTAISGSTDLPPNVTVVLDENPLCSNTTLVQFCGSEGATVTNGSFTTNSSFCPPQGCPPPYEYSVNCFCALPLLVAYRLKSPGFSDFAPYLNEFETYMTTGLQLSTDQLEYDFYWQVGPRLRMDLKFFPLYVNSTSNHTFNSSELLRITSMFTGWLIADSDLFGPYELIGFNLLGPYKDEIGKRSNSGISTGALVGIIVGAIACAVTLSAIVTLLILRIKLRGYHTVSKRRHASRISIKIDGVRAFTYGELSSATNNFSISAQVGQGGYGKVYKGTLSDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMSNGTLRDHLSVTAKEPLTFAMRLKIALGAAKGLMYLHTEADPPIFHRDVKASNILLDPKFSAKVADFGLSRLAPVPDMEGVVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMHPISHGKNIVREVNIAYQRGVIFSIIDGRMGSYPSEQVEKFLTLALKCCEDEPEARPRMAEVVRELENIWYTMPESDTKRAEFISSDSGKTDSHSIPSSSSASAMKTPFVSGDVSGSDLVSGVIPSINPR* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01112 873 Gene3D Ribonuclease Inhibitor 218 304 IPR032675 -
Phac6g01112 873 Pfam Protein kinase domain 542 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01112 873 ProSiteProfiles Protein kinase domain profile. 540 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01112 873 CDD STKc_IRAK 546 812 - -
Phac6g01112 873 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 616 825 - -
Phac6g01112 873 SMART serkin_6 540 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01112 873 SUPERFAMILY Protein kinase-like (PK-like) 525 831 IPR011009 -
Phac6g01112 873 SUPERFAMILY L domain-like 12 315 - -
Phac6g01112 873 PANTHER RECEPTOR-LIKE PROTEIN 55 14 812 - -
Phac6g01112 873 MobiDBLite consensus disorder prediction 824 873 - -
Phac6g01112 873 Gene3D Transferase(Phosphotransferase) domain 1 616 832 - -
Phac6g01112 873 Gene3D Phosphorylase Kinase; domain 1 510 615 - -
Phac6g01112 873 Pfam Leucine rich repeat 75 135 IPR001611 GO:0005515
Phac6g01112 873 ProSitePatterns Protein kinases ATP-binding region signature. 546 568 IPR017441 GO:0005524
Phac6g01112 873 Gene3D Ribonuclease Inhibitor 6 108 IPR032675 -
Phac6g01112 873 MobiDBLite consensus disorder prediction 831 853 - -
Phac6g01112 873 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 110 216 - -
Phac6g01112 873 FunFam Leucine-rich repeat protein kinase family protein 505 615 - -
Phac6g01112 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Phac6g01112 873 Gene3D Ribonuclease Inhibitor 109 217 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01112 Phac-Chr6 14985194 14996049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01112 10 822 Receptor kinase-like Gene Family AT5G01950 59.636 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Phac6g01112 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01112 - - gmx:100786467 1497.64