Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01108 ATGATGACTGACAAAGTTTACTCCAAATTCAATTGCCAGTATATTATTCCTTCCAGAAAACAACTCTCCATGAAGTTCCTTTCTACTTCAGTCACTTCTTTTCTTTATGTCATAGTGATTCTTTTCCCTTTGGTTATTGGTGATCTAAGTTCAGATAAGCAAGCCCTTCTCGATTTTGCTAATGCTATCCCCCACCGCCGAAACCTTATGTGGAATCCATCCACCTCAGTCTGTAAATCTTGGGTAGGCATCACTTGCAATGAAAATAGAACTCGTGTTGTTAATGTTCGGCTTCCTGGAGTTGGACTAGTTGGCACCATCCCATCCAATACACTTGGCAAGCTTGATGCTGTGAAAATTATTAGCCTTCGCTCCAACCTACTCAGTGGAAATCTCCCTGCTGACATTGCTTCTCTTCCTTCTCTTCAGTATCTCTACCTCCAGCATAACAACCTTTCTGGTGATATACCTGCCTCATTGTCTCCCCAACTTGTTGTACTTGATTTGTCATATAATTCCTTCTCTGGTGGCATTCCAGAGACATTTCAAAATTTTTCAGAATTAACTAGTTTGAATCTCCAAAACAACTCCCTATCCGGACAGATACCTAATCTCAATGTAACTCAGCTCAGGCTTTTGAATTTAAGCTACAACCATTTGAATGGCTCTATTCCTAAAGCTCTTCATATTTTTCCAAATTCTTCCTTTGAAGGAAACTCACTTTTATGCGGACCCCCTCTAAAGCCATGCTCTGGGGTTCCTCCTACACCTTCTCCTGCCTTGACTCCACCTCCATCATCAAATCCAGGGAGACAAAACTCAAAATACAAGTTGAGTAAAATAGCTATCATTGCAATTGGTGTTGGAGGAGCTGTGGTGTTATTCTTTATTGCTCTTGTTATTGTTATTTGCTGTTTGAAGAACGACGGCAGAGGCTCCAATGTGATTAAGGGGAAGGGCTCTAGTGGTGGCAGGGGTGAGAAGCCAAAAGAAGAGTTTGGGAGTGGGGTTCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTTGAGGGCAGTTCTTATAATTTTGATCTTGAGGATTTGCTGAGAGCTTCAGCTGAAGTCCTGGGAAAGGGTAGTTATGGTACTGCCTATAAGGCCATACTGGAGGAGTCAATGACTGTTGTGGTGAAAAGATTGAAAGAAGTTGTGGTAGGGAAGAAGGACTTTGAACAGCAGATGGACTTTATTGGAAGAGTTGGACAACACACAAATGTGGTGCCCCTTCGTGCTTATTATTATTCAAAAGATGAAAAGCTTTTGGTTTATGACTATATCCCTGCTGGCAACCTGCACACACTCTTGCACGGTGGAAGGACAGGTGGAAGAACTCCCTTAGACTGGGAGTCCCGAATAAAAATATCTCTTGGAAGTGCCAAAGGACTAGCTCACATTCATTCTGTTGGTGGTTCTAAATTCACACATGGAAACATTAAGTCCTCAAATGTCCTCCTTAACCAAGATAACGATGGCTGCATTTCTGATTTTGGCCTCGCCTCCCTTATGAACGTTCCTGCTAACCCTTCTAGAGCTGCTGGTTATCGAGCTCCAGAGGTGGTTGAAACCCGTAAACACTCTCATAAATCAGATGTGTACAGCTTCGGTGTCCTCCTTCTTGAGATGCTTACTGGGAAGGCTCCTCTCCAATCTCCTGGACGTGATGACATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTTGTTAGGGAAGAATGGACTGCCGAAGTTTTTGATGTTGAGCTTATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAGATGTTGCAGATAGCCATGGCCTGTGTGGCAAAGATGCCAGATATGAGACCTAGTATGGATGAAGTAGTAAGACTGATCGAAGAGATCCGGCAATCTGACTTAGAGAACCGACCATCTTCTGAAGAAAATAAATCTAAGGACTCAAATGTTCAGACTCCATAG 1974 0.4286 MMTDKVYSKFNCQYIIPSRKQLSMKFLSTSVTSFLYVIVILFPLVIGDLSSDKQALLDFANAIPHRRNLMWNPSTSVCKSWVGITCNENRTRVVNVRLPGVGLVGTIPSNTLGKLDAVKIISLRSNLLSGNLPADIASLPSLQYLYLQHNNLSGDIPASLSPQLVVLDLSYNSFSGGIPETFQNFSELTSLNLQNNSLSGQIPNLNVTQLRLLNLSYNHLNGSIPKALHIFPNSSFEGNSLLCGPPLKPCSGVPPTPSPALTPPPSSNPGRQNSKYKLSKIAIIAIGVGGAVVLFFIALVIVICCLKNDGRGSNVIKGKGSSGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESMTVVVKRLKEVVVGKKDFEQQMDFIGRVGQHTNVVPLRAYYYSKDEKLLVYDYIPAGNLHTLLHGGRTGGRTPLDWESRIKISLGSAKGLAHIHSVGGSKFTHGNIKSSNVLLNQDNDGCISDFGLASLMNVPANPSRAAGYRAPEVVETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKMPDMRPSMDEVVRLIEEIRQSDLENRPSSEENKSKDSNVQTP* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01108 657 MobiDBLite consensus disorder prediction 323 337 - -
Phac6g01108 657 Gene3D Transferase(Phosphotransferase) domain 1 438 656 - -
Phac6g01108 657 ProSitePatterns Protein kinases ATP-binding region signature. 368 399 IPR017441 GO:0005524
Phac6g01108 657 SUPERFAMILY L domain-like 51 250 - -
Phac6g01108 657 Pfam Leucine rich repeat 106 152 IPR001611 GO:0005515
Phac6g01108 657 Gene3D Phosphorylase Kinase; domain 1 330 437 - -
Phac6g01108 657 MobiDBLite consensus disorder prediction 316 337 - -
Phac6g01108 657 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515
Phac6g01108 657 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Phac6g01108 657 PANTHER OS05G0588300 PROTEIN 35 645 - -
Phac6g01108 657 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 438 644 - -
Phac6g01108 657 Pfam Leucine rich repeat N-terminal domain 50 87 IPR013210 -
Phac6g01108 657 Pfam Protein kinase domain 365 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01108 657 FunFam Leucine-rich repeat receptor-like protein kinase 51 161 - -
Phac6g01108 657 Gene3D Ribonuclease Inhibitor 49 204 IPR032675 -
Phac6g01108 657 Gene3D Ribonuclease Inhibitor 205 251 IPR032675 -
Phac6g01108 657 MobiDBLite consensus disorder prediction 634 657 - -
Phac6g01108 657 FunFam pollen receptor-like kinase 1 330 437 - -
Phac6g01108 657 MobiDBLite consensus disorder prediction 253 272 - -
Phac6g01108 657 SUPERFAMILY Protein kinase-like (PK-like) 366 639 IPR011009 -
Phac6g01108 657 ProSiteProfiles Protein kinase domain profile. 362 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01108 657 MobiDBLite consensus disorder prediction 634 648 - -
Phac6g01108 657 FunFam Leucine-rich repeat receptor-like protein kinase 162 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01108 Phac-Chr6 14922975 14927646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01108 23 655 Receptor kinase-like Gene Family AT5G58300 66.823 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac6g01108 Pkinase 9.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01108 - - gmx:100796171 1132.47