Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01104 ATGACTCACACATACCAACCTTTCATCTCCCTCCAACCAACCATGAACCTACACCACCCCTTTAACCCACCCACCTCAACCACAAAATTTTACACCCACCCACCACGCAAAACCTCCAAAAAACCCCAACAACGCCACCACAAGCTCCTCCGGGTCATCCTCACCGACCACGACGCCACCGACTCCGACTCCTCCGCCGACGATGAGACTCCAAAAAACCCTTCAAAACACAAAAAAGTCAAAAGAGAAATCACCCACATCACCATAAGCTTTCCCTTTATCCCACAACCCCCAACACCAACCCCAACGGTAACACCTCCTTCTTTTTCCACTAACCCGACCCCTTTAACCCAACCCGAGAAGCGACCCGCCGCCCCTCGCTGCCGGAACAAGTTTCGAGGTGTCCGGCAGAGACCATGGGGACGGTGGACCGCCGAGATCCGAGACCCGATCCAAAGAAAACGGGTCTGGCTCGGCACCTTCTACACGGCGGAGGAAGCCGCCGCCGTGTACGACGAGGCCGCCGTGAAGCTCAAGGGCCCTGACGCCGTCACCAACTTCCCCCAAGCCGCCACCGTAAAAAGAGAACTCCAAGTTTCGCCGCCGGAGGCCGCCTGCTCCGGCGAGGGTTTCTCGTCGCCGACGTCCGTCCTTGCCTTCTGCGACGGTGACTCCACGCCGTTCGACGGTTTCCGTTACGGCGAGGTCGATGCGTTCGGGTTTGACATCGACGCGCCGTTTAGTATGACAGACGTTAACTTGGGCGTGGTGAGTCAGCGCTTCGCGAAGGAAGAGTTCGGCGAGTTTGACCCGGACGAGTTCCTGACGTGGCCAAGTTAA 840 0.5786 MTHTYQPFISLQPTMNLHHPFNPPTSTTKFYTHPPRKTSKKPQQRHHKLLRVILTDHDATDSDSSADDETPKNPSKHKKVKREITHITISFPFIPQPPTPTPTVTPPSFSTNPTPLTQPEKRPAAPRCRNKFRGVRQRPWGRWTAEIRDPIQRKRVWLGTFYTAEEAAAVYDEAAVKLKGPDAVTNFPQAATVKRELQVSPPEAACSGEGFSSPTSVLAFCDGDSTPFDGFRYGEVDAFGFDIDAPFSMTDVNLGVVSQRFAKEEFGEFDPDEFLTWPS* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01104 279 SMART rav1_2 131 194 IPR001471 GO:0003700|GO:0006355
Phac6g01104 279 SUPERFAMILY DNA-binding domain 131 189 IPR016177 GO:0003677
Phac6g01104 279 FunFam Ethylene-responsive transcription factor 2 130 189 - -
Phac6g01104 279 CDD AP2 131 190 IPR001471 GO:0003700|GO:0006355
Phac6g01104 279 MobiDBLite consensus disorder prediction 34 48 - -
Phac6g01104 279 ProSiteProfiles AP2/ERF domain profile. 131 188 IPR001471 GO:0003700|GO:0006355
Phac6g01104 279 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 47 222 - -
Phac6g01104 279 Pfam AP2 domain 131 180 IPR001471 GO:0003700|GO:0006355
Phac6g01104 279 MobiDBLite consensus disorder prediction 1 33 - -
Phac6g01104 279 MobiDBLite consensus disorder prediction 93 113 - -
Phac6g01104 279 PIRSF PTI6 21 279 IPR017392 GO:0003700
Phac6g01104 279 Gene3D AP2/ERF domain 130 190 IPR036955 GO:0003700|GO:0006355
Phac6g01104 279 PRINTS Ethylene responsive element binding protein signature 132 143 IPR001471 GO:0003700|GO:0006355
Phac6g01104 279 PRINTS Ethylene responsive element binding protein signature 154 170 IPR001471 GO:0003700|GO:0006355
Phac6g01104 279 MobiDBLite consensus disorder prediction 1 126 - -
Phac6g01104 279 MobiDBLite consensus disorder prediction 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01104 Phac-Chr6 14912552 14914006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01104 8 220 AP2-EREBP Transcription Factor Family AT4G27950 38.839 1.83e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac6g01104 AP2 9.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01104 K13434 - gmx:102660028 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g01104 6 14912552 14914006 Phac6g01104 6 14912552 14914006 ECH