Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01095 ATGGGTTCTGATATTTGCGTCGTTAATGGTTCGTGCACTCATGAATGGAGAAAGGGGTGGCCTCTGCGATCTGGTGGATTCGCCCAACTGTGCTGCAAGTGCGGATTTATGGAGGAGTGGAAGGGTGACATCCTTGAGCCATTATCCACATACGAGAATTCAGTTTTCTGCAGCAAATTCCACCACCAACAAACTGGTTGGAGGGAGTGTAACTTTTGCAACAAGCCTATCCACTGCGGATGCATGGTATCTAGATCTTTGTTCGAGCATCTTGACTATGGTGGTATAGGATGTGTTAGCTGTGTAAATACTAGCCAACTTAGTACGATGAGGAATATTGAAAATCCAAATGGGCCTGTTTCATTGATAAAAAATAATGGAAGTGATCGGCCTTCTTCTCATTCTGAGGGAAGACTGTTTGCGCGTGGTGTTGACGAAGGAAAACTTATGCAATTCTGCAAAATTATTGAAGCTAGTGAATCCAGCCGATGGAATAATGCTCAAAGAGATGGCATCATTTCTCGTCACGGGCACAACAACCAAGAAGCCAAGTGTTCTTTTGGGGAAGGAGACATTGGTTTTTCAAATGTGATGAAGCCATCTGTTCAGTCATTAACATTTGCTACACTAGAAAATAATAGGTCACCATGGGAGATTAAAAACATCCATGAAGCGAATGTGCAGCCATCATTGAGTATGTACCTGGGAAATACATCAGGGAACAACTCTGTCCTGCCCTCTGCTGGAGAGGCAGTGGAAGGAAGACTAGAGGGAAAACCATCTCCTCCCTTTCATCAAGGGCAAAGGTCTCGCCCTATATTTCCCAAACCGTTGAAGAGTGGACTTTCCATGAATGTGGAAATAGATAAAGGTACAATTTCTCAATCACGTGTTGCTCGGCCACCTGCAGATGGCAGAGGAAAAAATCAGTTACTTCCTCGATACTGGCCGAGGATTACTGATCAAGAGTTGGAGCGACTGTCTGGAGATTTGAAATCCACCGTTGTGCCATTATTTGAGAAGGTATTGAGTGCCAGTGATGCAGGTCGAATTGGCCGTCTTGTTCTTCCAAAAGCCTGCGCTGAGGCATATTTCCCTTCTATTTCACAATCTGAGGGTGTTCCTTTGCGAATGCAAGATGTGAAGGGGAACGAGTGGACATTTCAGTTCAGATTTTGGCCAAATAACAATAGTAGAATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGGCGATGCAATTACGTGCTGGTGATACTGTAACATTTAGTCGGATAGATCCTGGAGGCAAACTTGTAATGGGTTTCAGAAGGGCATCAAATTCTGCAGATACACAGGATACCTCCACATCTGCACAATCTAATTCAGCAAAGGGAACCACCTCTGCTGGAACTGAGAATCTGCCATCAGGAAGTAGTCATGCCAATCTTCTCCTTTCAATGAAGGGGGGGAATGTGGAACCTCACTTAAATGGACAAAGAGAACATCTACTTTTGGGTACTGGAACTTCCGAGTTGCTTATAACTGAAAATAATGGGATGACAAACAATAGTTCACTACAACAAAAAAATTTGGTTTTAGAGAAGAAGAAGACTCGTAATATTGGGCCTAAAAGTAAAAGGTTGCTTATTGACAATGAAGATGCTAGGGAGTTAAAACTTACATGGGAAGAAGCACAGGATTTACTTCGTCCTCCTCCTAGTGTCAAGCCAAGCATTGTCACAATTGAGGACCAAGTATTTGAAGAATACGATGAACCCCCAGTTTTTGGAAAGAGAACTATATTCAGTACTTGTTCTTCTGGCGTGAAGGAACAATGGGCTCAATGTGATGATTGTTCTAAATGGCGAAAGGTTCCAATTGATGCTCTTCTTCCTGCCAATTGGACATGTTTTGACAATGCTTGGGATTCAATAAGATGTTCATGCACTGTACCTGAAGAGCTAAGTTCAGGGGAACTAGAAAATCTTTTGAAAACCGACAAAGATTTTAAGAAGCGACGAAGTGATGAAAAGAGCAAGTCAATCCAAGAACACGAGGCATCTGGCTTGGAAGCTCTTGCCTGTGCAGCAGCCCTGGGAGAAAATCTTGTTGACACTGCCGAATCATCAGCTGGAGCCACCACCAAGCATCCTAGACACCGTCCTGGCTGCTCTTGCATTGTGTGCATCCAGCCCCCAAGTGGCAAGGGGAGACACAAGCCGACATGCACATGCAACGTCTGCTTGACCGTGAAGCGCCGGTTCAAAACCCTCATGCTTCGAAAGAAGAAACGGCAATCCGAACGCGAAGCAGAAGCTGCCCAGAAAGATCTAGTTCTCCAGAAAGACGAGTCAGATACCAATGAAACATCAAGAGATGATGCATCTCAGTTGGAGAAAGAGGTAGTAGGACTAAGCAGAAGTCAAGCTGAAGGGGGTGAGTCCAGTGCTGCTGGACAAATTGATCTGAATTCTCATCCCAACCGTGAAGACATGCAAGTGGATATCACTGGAGTTATGTTTTGCGAAACAGACCCTTCTACAGTACGGGAATATATGAACCAAAATGGTCCAAGAAGCTATAACAATGACTTGCAGAATGGTGAAAATTCTTCTTTGCACACTTCTCAATCCAATGGAGAAGGTCAGAGACACTTCTCTGATCTAAGAAGCTTTGCATCCATTATGTGGAACCAAGAAAGAAGAGATGAGGAAGACAGTGAACCCAACCAAAACCAAAACAATCTTTGTTAA 2736 0.4397 MGSDICVVNGSCTHEWRKGWPLRSGGFAQLCCKCGFMEEWKGDILEPLSTYENSVFCSKFHHQQTGWRECNFCNKPIHCGCMVSRSLFEHLDYGGIGCVSCVNTSQLSTMRNIENPNGPVSLIKNNGSDRPSSHSEGRLFARGVDEGKLMQFCKIIEASESSRWNNAQRDGIISRHGHNNQEAKCSFGEGDIGFSNVMKPSVQSLTFATLENNRSPWEIKNIHEANVQPSLSMYLGNTSGNNSVLPSAGEAVEGRLEGKPSPPFHQGQRSRPIFPKPLKSGLSMNVEIDKGTISQSRVARPPADGRGKNQLLPRYWPRITDQELERLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPSISQSEGVPLRMQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQAMQLRAGDTVTFSRIDPGGKLVMGFRRASNSADTQDTSTSAQSNSAKGTTSAGTENLPSGSSHANLLLSMKGGNVEPHLNGQREHLLLGTGTSELLITENNGMTNNSSLQQKNLVLEKKKTRNIGPKSKRLLIDNEDARELKLTWEEAQDLLRPPPSVKPSIVTIEDQVFEEYDEPPVFGKRTIFSTCSSGVKEQWAQCDDCSKWRKVPIDALLPANWTCFDNAWDSIRCSCTVPEELSSGELENLLKTDKDFKKRRSDEKSKSIQEHEASGLEALACAAALGENLVDTAESSAGATTKHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCLTVKRRFKTLMLRKKKRQSEREAEAAQKDLVLQKDESDTNETSRDDASQLEKEVVGLSRSQAEGGESSAAGQIDLNSHPNREDMQVDITGVMFCETDPSTVREYMNQNGPRSYNNDLQNGENSSLHTSQSNGEGQRHFSDLRSFASIMWNQERRDEEDSEPNQNQNNLC* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01095 911 SUPERFAMILY DNA-binding pseudobarrel domain 337 438 IPR015300 -
Phac6g01095 911 MobiDBLite consensus disorder prediction 755 822 - -
Phac6g01095 911 MobiDBLite consensus disorder prediction 439 475 - -
Phac6g01095 911 Gene3D - 604 659 - -
Phac6g01095 911 Pfam B3 DNA binding domain 339 439 IPR003340 GO:0003677
Phac6g01095 911 MobiDBLite consensus disorder prediction 438 475 - -
Phac6g01095 911 Pfam CW-type Zinc Finger 606 648 IPR011124 GO:0008270
Phac6g01095 911 MobiDBLite consensus disorder prediction 891 911 - -
Phac6g01095 911 MobiDBLite consensus disorder prediction 844 878 - -
Phac6g01095 911 MobiDBLite consensus disorder prediction 757 794 - -
Phac6g01095 911 Gene3D - 317 444 IPR015300 -
Phac6g01095 911 ProSiteProfiles B3 DNA-binding domain profile. 339 440 IPR003340 GO:0003677
Phac6g01095 911 FunFam B3 domain-containing transcription repressor VAL1 317 444 - -
Phac6g01095 911 MobiDBLite consensus disorder prediction 803 822 - -
Phac6g01095 911 ProSiteProfiles Zinc finger CW-type profile. 601 651 IPR011124 GO:0008270
Phac6g01095 911 CDD B3_DNA 337 438 IPR003340 GO:0003677
Phac6g01095 911 Coils Coil 758 778 - -
Phac6g01095 911 SMART B3_2 339 440 IPR003340 GO:0003677
Phac6g01095 911 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01095 Phac-Chr6 14830276 14837749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01095 1 828 B3 DNA Binding Superfamily AT2G30470 48.091 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac6g01095 B3 1.4e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01095 K09287 - gmx:100789848 1511.89