Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01080 ATGGACACCGACATTTCCCGGTGGGTGATGGAGTTCCTCCTCCGCAGTTCCGTCCCCGATTCCCTAATCCAAAAAACTCTAATCGCCCTTCCTCTCTCCGGCGCCGACTCCCGCCTCAAAAAGACCCTTCTCCTCCGCACTCTTCGCACCCTCCTCCTCAAGGCCTCCCTCTCGGAAACCGCGCTCCAAATCCTCGAACTCCTCGAAGACCTGGACGGTGCCTCCGCCTCCGCCTCGCGCCGCCGCGCGTATGTCGCCGTCGCCGTCGAGTGCACTGTCAAGTACCTCGCCGCCGCCCCCGATGACGCCAACGGGGAGTTCTCTGGCGCCGTGAATCGAATCTGGCGCGGCCGCGTGGTGGCGCTGGAGGCGCGCCGGAGCGGGCTGGTGTCTGGAGAGCTGGCCCGGTGGCGGGACGACTTGGAGGCGGCGCTTGGGGATTCTAGGGCTTGCGAGAGGTTGGCGGATTTGAATAGCAGGAGGGAGGCGATGAACGAGGTGAGGGCGTATTTGAAAGAAGCGTCGGAATCGATGGGTCCTTCGTTCTTGGAATCGGTTGCGGCGATGTCGAAGGGTTTAACCAAAGAGAAAGATGATTTTGTTGTTAGTGGTGGTAACAAGAGAGACAATGATCATGAGAATGACAATGATGCATGCATGGAGGATGTGGCAATGCATGATGAGAATCAGGGCAAGCAACAATTGGAAGGGAAAATTGATGCGAATCAGGAAGTGGGTGGGTGTGACTTGCTACTTGAGAGTGATAAAGTAATTCAGAAGCAGAATCTTCGGGTTAAACACAAGCACTCTGCACTTCGTGCATGTCATAGGGGAGTTAAAATATCTGGTTCAGAGGAAGTGGAGTCTGCAAAATCATGGAGCAAACATGATTCTGTTCCTTCTGAAGTCAGAAAAGTTAGGGAATCCCTTAAATCAAGTTCTTATGAGTTAAGAGCATTGGTCAATGATCCTCTTCCTGATGCATTACGTCTATCTGAAGTTGTAAGATCTAAATTTGCAACAAGTGATACAAACATTGAGCCACCTACTGAAAACCAGAGTTCACATATAGATGTACCAGATCCAGATGTTTGCCAGAGTATTGTACCTTTTCAGCCTAATGATGTCCATCTTGGGAAGAAGTCTTCTGTTCATTGTAGTAATATACATCAGCCCAACATAATAGAACGGAACAGAAGTGCCCGTACCAATGAGTGGGATGATTCAATAGACACCTCACCACTAGCAAGACAGTCTAGGAGGAGGAAAAGGAGATGGAGTTCGTTGGAAGAGGAGACGCTAAGGGCTGGTGTAAAAATGTTTGGAGAAGGAAACTGGGCAACAATCAGAAGTTTTTACAGTAACATATTTGACAATAGAAGTGGAGTTGATCTGAAGGACAAGTGGAGAAACATGATACGATGA 1425 0.4996 MDTDISRWVMEFLLRSSVPDSLIQKTLIALPLSGADSRLKKTLLLRTLRTLLLKASLSETALQILELLEDLDGASASASRRRAYVAVAVECTVKYLAAAPDDANGEFSGAVNRIWRGRVVALEARRSGLVSGELARWRDDLEAALGDSRACERLADLNSRREAMNEVRAYLKEASESMGPSFLESVAAMSKGLTKEKDDFVVSGGNKRDNDHENDNDACMEDVAMHDENQGKQQLEGKIDANQEVGGCDLLLESDKVIQKQNLRVKHKHSALRACHRGVKISGSEEVESAKSWSKHDSVPSEVRKVRESLKSSSYELRALVNDPLPDALRLSEVVRSKFATSDTNIEPPTENQSSHIDVPDPDVCQSIVPFQPNDVHLGKKSSVHCSNIHQPNIIERNRSARTNEWDDSIDTSPLARQSRRRKRRWSSLEEETLRAGVKMFGEGNWATIRSFYSNIFDNRSGVDLKDKWRNMIR* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01080 474 SMART sant 422 474 IPR001005 -
Phac6g01080 474 PANTHER MYB TRANSCRIPTION FACTOR 1 474 - -
Phac6g01080 474 Coils Coil 472 474 - -
Phac6g01080 474 Pfam Myb-like DNA-binding domain 423 472 IPR001005 -
Phac6g01080 474 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 418 474 IPR017930 -
Phac6g01080 474 Gene3D - 415 474 - -
Phac6g01080 474 SUPERFAMILY Homeodomain-like 420 473 IPR009057 -
Phac6g01080 474 CDD SANT_TRF 430 474 - -
Phac6g01080 474 ProSiteProfiles Myb-like domain profile. 418 473 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01080 Phac-Chr6 14648499 14655277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01080 426 473 Single Myb Histone (SMH) Gene Family AT1G15720 50.000 1.76e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac6g01080 Myb_DNA-binding 2.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01080 - K11111 vun:114187915 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g01080 6 14648499 14655277 Phac6g01080 6 14648499 14655277 ECH