Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01066 ATGTATTCCAATAAAGGGTATAAAGAGGATCGCAAAGCTGAGCCTCGTTACATTGAGACCGACCCAAATGGTAGATATGCTCGGGTTGGAGATATTTTAGGAAAAGGAGCAATGAAGACAGTGTATAAAGCAATTGATGAGGTCCTTGGAATAGAGGTTGCATGGAATCAGGTCAAACTCAATGAGGCATTTCGCAAGCCAGAGGACTTGGAGCGGCTATATTTAGAGGTTCATCTCCTCAGCACCCTCAAGCACCAATCCATCATGAGATTCTACACCTCTTGGATTGATGTCAACAATAAGACCTTCAACTTCATTACAGAAATGTTTACTTCAGGGACTCTAAGAGAATACAGGAAGAAATATAAGCACATAGGTCTGAAAGCAATAAAGAGTTGGGCTCGCCAAATCTTACAGGGTCTTGTTTATCTGCATGAACATGATCCTCCAGTAATTCATAGGGACCTCAAATGTGATAATATATTTGTCAATGGCCATCTCGGACAAGTGAAAATTGGTGACCTGGGTCTAGCAGCAATTCTCCATGGTTCCCAACCAGCTCACAGTGTCATAGGCACTCCCGAGTTCATGGCACCAGAATTGTACGAGGAAGAATACAATGAACTTGTTGATGTCTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACATCTGATTATCCATACAGTGAATGTACTAACCCTGCACAGATATACAAAAAAGTAACATCGGGGAAGCTACCAGCAGCATTTTTCAGGATTGAAGACACAGAAGCACAGAAGTTTATTGGCAAATGTCTAATAGCTGCAGCAAAGAGACCATCTGCAAAAGAATTGTTGAATGATCAATTTCTTTTGTCGAATGATGCATCATCCATGGCAAAGATTGGGATTCAGAAGCCGTTTCTAAATTACAGTGAAATGGAAACACTTCAATTGAGTGATGATTTACCTATGACTAAAATGTCAATAACTGGGAAGCTGAATCCAGAAGATGACACTATCTTTCTCAAAGTGAAAATTTCTCAGAAGGATGGTTCTTGTAGGAATGTATACTTTCCCTTTGATATTTACACAGACACCCCTATTGATGTTGCAATAGAGATGGTGAAAGAGTTGGAAATCACAGATTTGAAGCCTTCTGATATTGCAAGTATGATTGAAGGAGAGATATCTGTGCTGCTGCCGAATTGGAGGAATTGTAACTGTCCAGACACCTGGCATACATTCAGTTATAATGATGACAAGGACAATGAAGATCCTCACCATCATGTCCACTCTGTTTCTTCTTGTTCATCATCCCAAGAGTCAACACCAGGCTTAGTCATCAGAGTTGATGACTTATTAAATGGTTGTCATTGGCTCCATGGTGATGGACTTGATGATGCCAGTTCAATATGTTCTTCACATGGGAACTCAAACTTTTGTTCAGTGGATGACCAGGAGGAACACAATAAGGCTTCTACAAGAAAAGATAAACACCCCATCATAAAGAGTCACATGTGTACTAGATTTTCCCCTAATGAAGACCCCATCACTGTGAGCCATTGCAAAATTCTAGCAGGACCACAGACACCTACTGGCAAAAGTAACAGGATGATAGACAATCGTAGACTAACTAGGAACAAGTCATTAATTGATACGAGAAGCCAGCTACTGCACAGATCACTGGTTGAGGAGATAAACAAAAGAAGATTCAAGACAGTTGGAGCTGTGGAAAATATTGGATTTGTGACACCTTATGAGGTTACCAACAAAAAGTCAAATCCAGCATGTGGTGCTCTTGATGTGAACTCTTCAAGAAGTAGGAAGGGAAAAAACTTGAGGGACAATTTTTTTTGA 1842 0.4028 MYSNKGYKEDRKAEPRYIETDPNGRYARVGDILGKGAMKTVYKAIDEVLGIEVAWNQVKLNEAFRKPEDLERLYLEVHLLSTLKHQSIMRFYTSWIDVNNKTFNFITEMFTSGTLREYRKKYKHIGLKAIKSWARQILQGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECTNPAQIYKKVTSGKLPAAFFRIEDTEAQKFIGKCLIAAAKRPSAKELLNDQFLLSNDASSMAKIGIQKPFLNYSEMETLQLSDDLPMTKMSITGKLNPEDDTIFLKVKISQKDGSCRNVYFPFDIYTDTPIDVAIEMVKELEITDLKPSDIASMIEGEISVLLPNWRNCNCPDTWHTFSYNDDKDNEDPHHHVHSVSSCSSSQESTPGLVIRVDDLLNGCHWLHGDGLDDASSICSSHGNSNFCSVDDQEEHNKASTRKDKHPIIKSHMCTRFSPNEDPITVSHCKILAGPQTPTGKSNRMIDNRRLTRNKSLIDTRSQLLHRSLVEEINKRRFKTVGAVENIGFVTPYEVTNKKSNPACGALDVNSSRSRKGKNLRDNFF* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01066 613 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01066 613 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
Phac6g01066 613 SUPERFAMILY Protein kinase-like (PK-like) 29 322 IPR011009 -
Phac6g01066 613 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 437 - -
Phac6g01066 613 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Phac6g01066 613 CDD STKc_WNK 25 285 - -
Phac6g01066 613 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Phac6g01066 613 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01066 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Phac6g01066 613 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01066 613 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01066 Phac-Chr6 14557569 14563012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01066 17 586 MAP Kinase Kinase Kinase AT5G58350 57.118 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Phac6g01066 Pkinase 8.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01066 K08867 - gmx:100778102 1024.62