Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01052 ATGTGTCTTCTTGATTGCAGCTATGTGGCTGAGATTCATAAGGTGATGCCCCTGCTCTTGATGCCCCACTTAATGCTTGGTGGTGAGCTCTTCAACAAGGTGGCCAAAGGAAAACTCAAGGAAGATGTCGCACACAAGTATTTTAAGCAGCTAATTAATGCTGTGGATTTTTGTCACAGTAGAGGTGTGTTCCACAGAGACATAAAGCCTGAGAACATTCTATTGGATGAAAATGGGAATCTAAAGGTCTCTGATTTTGGCTTAAGTGCACTTGTTGAATCCAAGAGGCAGGATGGTTTACTCCATACTCCTTGCGGCACACCTGCTTATGTTGCTCCTGAAGTCATCAAAAGGAAGGGATATGATGGTACAAAAGCTGATATTTGGTCTTGTGGAATAGTTCTGTTTGTCTTGTTGGCAGGTTATCTCCCTTTTCATGACCCCAATTTGATAGAGATGTATAGGAAGATAAGCAAAGCAGAATTAAAATGTCCTAATTGGTTCCCACCTGAAGTATGCAAGCTATTGGGCATGATGTTGGATCCAAATCCTGAGACTAGGATTCCCATATCTAATATTAGGGAATATTGTTGGTTTAAGAAAGAACCTAATGTTAAAAACAAAAGACCTGTAGTGGAAAACAACACTGTCTCTTCTTCAGGCACTGTTCTTCCTGATCAAAATGATTGTGATGGTTTAGCAGCAGAAGCAAACGAAGAGTCAGTTGCCCCCTTAAGTATAAATGCCTTTGACATTATCTCCCGTTCTGTGGGTTTTGATCTTTCTAGATTCTTTGATGACAGTTTTCAGAAAAAGGAAGCAAGATTTAGTTCAAGGTTACCTGCAAATGTCATCATCTCCAAGCTGGAAGACATTGCTAAGCAACTGAGGATGAAAATAAAGAAAAAAGCTGCGGGTTTGTTGAAATTAGAGGGCTTGAAGGAAGGTAGGAAGGGGGTTTTAACCATTGATGCAGAGATCTTTCAAGTTACGCCTTGTTTCCATTTGGTGGAGGTAAAAAAATCAAATGGAGATACATTGGAGTATCAGAAAATATTGAAAGAGGAAATTAGGCCTGCTCTTCAGGATATTGTTTGGGTCTGGCAAAGTGACCAACAACTGCAATCACAAACGTCAGAGGAACAGCTACATACCGATGACCAGCAGCAGCAACAACCACAGTCATAA 1188 0.4066 MCLLDCSYVAEIHKVMPLLLMPHLMLGGELFNKVAKGKLKEDVAHKYFKQLINAVDFCHSRGVFHRDIKPENILLDENGNLKVSDFGLSALVESKRQDGLLHTPCGTPAYVAPEVIKRKGYDGTKADIWSCGIVLFVLLAGYLPFHDPNLIEMYRKISKAELKCPNWFPPEVCKLLGMMLDPNPETRIPISNIREYCWFKKEPNVKNKRPVVENNTVSSSGTVLPDQNDCDGLAAEANEESVAPLSINAFDIISRSVGFDLSRFFDDSFQKKEARFSSRLPANVIISKLEDIAKQLRMKIKKKAAGLLKLEGLKEGRKGVLTIDAEIFQVTPCFHLVEVKKSNGDTLEYQKILKEEIRPALQDIVWVWQSDQQLQSQTSEEQLHTDDQQQQQPQS* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01052 395 SUPERFAMILY Protein kinase-like (PK-like) 19 200 IPR011009 -
Phac6g01052 395 CDD CIPK_C 248 362 - -
Phac6g01052 395 Pfam NAF domain 244 302 IPR004041 GO:0007165
Phac6g01052 395 SMART serkin_6 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01052 395 FunFam Non-specific serine/threonine protein kinase 242 366 - -
Phac6g01052 395 FunFam Non-specific serine/threonine protein kinase 25 206 - -
Phac6g01052 395 ProSiteProfiles NAF domain profile. 242 266 IPR018451 GO:0007165
Phac6g01052 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 63 75 IPR008271 GO:0004672|GO:0006468
Phac6g01052 395 Gene3D Kinase associated domain 1, KA1 246 367 - -
Phac6g01052 395 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 22 361 - -
Phac6g01052 395 Gene3D Transferase(Phosphotransferase) domain 1 3 245 - -
Phac6g01052 395 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g01052 395 Pfam Protein kinase domain 18 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01052 Phac-Chr6 14490681 14493765 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01052 9 372 CBL-interacting serine-threonine protein kinases AT5G58380 63.351 8.59e-171 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac6g01052 Pkinase 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01052 - - gmx:100790905 625.165