Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01037 ATGTCTGTCCCCATGGCAATAGCACTTTCAGGCCAACCTCTCCTAGGTCAACCAGTGATGGTAAAGCCATCAGAAGCAGAAAAGAATTTGGTTCAGTCTACAACAGCTGTTGCTAATGGATCCACTGGACTTATCAGTCCTTATTCTGGGGGAGCAAGAAGGCTCTATGTTGGAAATTTGCATATCAGTATGAGTGAAGCTGATATTCGTAAGGTGTTTGAAGCATTTGGTCAGGTTGAGCTAGTCCAGCTGCCACTTGATGAAAGTGGGCACTGTAAAGGTTTTGGCTTTGTACAGAACTTCCCTATGGACTCAATGGAGTCATGA 327 0.4465 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAVANGSTGLISPYSGGARRLYVGNLHISMSEADIRKVFEAFGQVELVQLPLDESGHCKGFGFVQNFPMDSMES* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01037 108 PANTHER SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED 1 99 IPR006509 GO:0003723|GO:0005634|GO:0006397
Phac6g01037 108 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 53 108 IPR000504 GO:0003723
Phac6g01037 108 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 55 99 IPR000504 GO:0003723
Phac6g01037 108 SUPERFAMILY RNA-binding domain, RBD 47 99 IPR035979 GO:0003676
Phac6g01037 108 Gene3D - 32 101 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01037 Phac-Chr6 14394112 14394698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01037 55 98 Eukaryotic Initiation Factors Gene Family AT3G16380 45.455 3.29e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01037 K13091 - gmx:100795336 186.808