LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac6g01031	ATGAGAGTACCTTTTGGGATGTTGTTGAGGGTTTTTGAGTCTTCTTTCGTGGGAAGGAAATCCGTTGTCAAGGAACGCTTCTCAAAGAAGTACAGGCATCCAGCTTTGGATTCAAAATTGACCCTCAAGCGCTTAAATGCGGAGGCTAGGTGCATGACCAAAGCAAGGCGACTTGGGGTTTGTACTCCTGTGCTGTTTGCTGTGGATCATGTGTTGCACACTTTAACATTTGAATATGTTACTGGCCCTTCAGTCAAAGATGTGTTTCTTGAATTCGGGTCACATGGAACTGATAAAGAGTGGCTGGACAATATTGCATCCCAAATTGGTGACGCAATTGGGAAGTTACATGATGGTGGTCTTATTCATGGTGATTTAACAACATCAAACATGTTATTGAAGAGTGATACGAAGCAGTTGGTTCTTATTGATTTTGGTTTGAGCTTCACTTCAACTCTTCCAGAAGATAAAGCTGTTGATTTGTATGTTCTGGAAAGATCTCTTATCTCAATGCATTCATCATGTGGGAATGTGATGGATCAAATTCTTGCTGCATACAGGAAGTCATCAAAACAGTGGTCATCCACATTAAACAAGCTAGCACAAGTGCGACAAAGAGGGCGAAAGAGGACCATGGTTGGATGA	645	0.4186	MRVPFGMLLRVFESSFVGRKSVVKERFSKKYRHPALDSKLTLKRLNAEARCMTKARRLGVCTPVLFAVDHVLHTLTFEYVTGPSVKDVFLEFGSHGTDKEWLDNIASQIGDAIGKLHDGGLIHGDLTTSNMLLKSDTKQLVLIDFGLSFTSTLPEDKAVDLYVLERSLISMHSSCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG*	215

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac6g01031	214	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	121	133	IPR008266	GO:0004672\|GO:0006468
	Phac6g01031	214	Gene3D	Transferase(Phosphotransferase) domain 1	96	211	-	-
	Phac6g01031	214	NCBIfam	KEOPS complex kinase/ATPase Bud32	11	208	IPR022495	GO:0004674
	Phac6g01031	214	ProSiteProfiles	Protein kinase domain profile.	1	214	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac6g01031	214	FunFam	Protein kinase superfamily protein	95	211	-	-
	Phac6g01031	214	FunFam	TP53-regulating kinase isoform X1	9	80	-	-
	Phac6g01031	214	Pfam	Protein kinase domain	30	150	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac6g01031	214	SMART	serkin_6	5	213	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac6g01031	214	Gene3D	Phosphorylase Kinase; domain 1	9	80	-	-
	Phac6g01031	214	PANTHER	NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE	9	214	IPR022495	GO:0004674
	Phac6g01031	214	SUPERFAMILY	Protein kinase-like (PK-like)	18	163	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac6g01031	Phac-Chr6	14367924	14369983	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Phac6g01031		Pkinase	4.4e-11	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac6g01031	K08851		-	gmx:100782376	384.415