Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01027 ATGACCACTTCTTTCTCTGACCTTCTCTCTTCTCCCACCGACCACAACCTAGGAGGCACCGAAAGACCTCAAGAGGTGTCGGATCAAACAGGTTCTTCTGGTGTGCCAAAATTCAAGTCCACACCACCTCCATCTCTCCCTCTTTTTCACCCTCAAAATCATCCTCTTCCACCCATTTCTCCCATTTCTCCTTCTTTCTTTAACATCCCTCATGGGTTAAGCCTTGCTGAACTTCTTGACTCTCCAGTTCTCCTTCACTCTTCTAACGTTTTGGCATCTCCAACCACTGAATCATTTGCTACTGGTCACGGCTTCAATTGGAAGAGCAGTTATGGGGAAAGCCAACACCATGTAAAAGAAGAAGACAAAAGCTTCTCAAGTTTCTCCTTCCAAACACAAACACAGATTCCTCTTGCATCTTCAACTGGATTTCAATCTTCAACCGGCATAGTTCAAACTGGGTGGAGTTTCCCAGAAACTGTTAAACAAGATGGTTTTTCTTCGAGAATGAGTATGAATATGGTGAAAACTGAAACCTCTTCTGCGATGCAGGGTTTTAACTCTGAGAATAACCGCAACAGTGCTGGTTTCCAATCAGATTATAACAATTACCAGCCACAAGTTCAGACCTTAAGCAGAAGATCAGATGATGGGTACAATTGGAGGAAATATGGGCAAAAGCAAGTGAAAGGAAGTGAAAATCCAAGAAGCTACTACAAGTGCACATACCCCAATTGTCCAACAAAGAAAAAGGTTGAGAGATCCTTAGATGGACAAATTACTGAGATTGTTTACAAAGGCAGTCATAATCATCCCAAACCTCAGGCTACCAAGAGGAACTCATTGTCTGCCTCATCACTTGCAATTCCTCATACAAATGGTGTCAACAATGAAATAACACAAGCCACTCATCAAATGGATTCGGTTGGAACTCCAGAAAACTCATCAATATCAATGGAAGATGATGATTTTGGTCAGAGCAAATCAGGAGGAGATGAGTTTGATAATAACGAACCTGATGCCAAAAGATGGAGAATAGAAGGTGAAAATGAGGGTATATCAGCTGTTGGAAGTAGAACAGTGAGAGAACCCAGAGTCGTGGTTCAGACAACCAGTGACATTGATATTCTAGATGATGGATACAGATGGAGGAAATATGGCCAAAAAGTAGTCAAGGGAAATCCAAACCCAAGGAGTTACTACAAGTGCACATTCCCAGGATGTCCAGTGAGGAAGCACGTAGAGAGAGCCTCACATGACCTAAGAGCAGTGATCACAACCTATGAGGGAAAGCACAACCATGACGTGCCTGCAGCACGTGGCAGTGGCAGCAACACAATCGGAAGATCAGTGCCTATAAACACTACCACAAACAGCACCACTAGTGCAGCCACTTCTATATACATCAATTCTCATCAGAATCTTAGACCACCAGCACCAGAAAGGACACAACAGTTCAACTCCAATATGCAGCAGGGCTCAGGAAGTTTTGGATTCTCAGGGTTTGGAAATCCATTAATGGGGTCTTACATGAACCAACAATCTGACAATGTGTTCACCTCTAGAGCCAAGGAGGAGCCAGGAGATGACTCGTTTCTTGACTCTTTGCTATGTTAA 1617 0.4329 MTTSFSDLLSSPTDHNLGGTERPQEVSDQTGSSGVPKFKSTPPPSLPLFHPQNHPLPPISPISPSFFNIPHGLSLAELLDSPVLLHSSNVLASPTTESFATGHGFNWKSSYGESQHHVKEEDKSFSSFSFQTQTQIPLASSTGFQSSTGIVQTGWSFPETVKQDGFSSRMSMNMVKTETSSAMQGFNSENNRNSAGFQSDYNNYQPQVQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGSHNHPKPQATKRNSLSASSLAIPHTNGVNNEITQATHQMDSVGTPENSSISMEDDDFGQSKSGGDEFDNNEPDAKRWRIEGENEGISAVGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTFPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSNTIGRSVPINTTTNSTTSAATSIYINSHQNLRPPAPERTQQFNSNMQQGSGSFGFSGFGNPLMGSYMNQQSDNVFTSRAKEEPGDDSFLDSLLC* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01027 538 MobiDBLite consensus disorder prediction 306 339 - -
Phac6g01027 538 FunFam WRKY transcription factor 204 275 - -
Phac6g01027 538 MobiDBLite consensus disorder prediction 439 458 - -
Phac6g01027 538 MobiDBLite consensus disorder prediction 433 458 - -
Phac6g01027 538 MobiDBLite consensus disorder prediction 40 55 - -
Phac6g01027 538 Gene3D WRKY domain 364 430 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g01027 538 MobiDBLite consensus disorder prediction 1 39 - -
Phac6g01027 538 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 79 469 IPR044810 GO:0003700
Phac6g01027 538 MobiDBLite consensus disorder prediction 325 339 - -
Phac6g01027 538 MobiDBLite consensus disorder prediction 306 323 - -
Phac6g01027 538 Gene3D WRKY domain 202 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g01027 538 ProSiteProfiles WRKY domain profile. 216 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01027 538 FunFam WRKY transcription factor 33 364 430 - -
Phac6g01027 538 SUPERFAMILY WRKY DNA-binding domain 369 437 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g01027 538 SMART WRKY_cls 215 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01027 538 SMART WRKY_cls 377 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01027 538 SUPERFAMILY WRKY DNA-binding domain 214 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac6g01027 538 MobiDBLite consensus disorder prediction 1 55 - -
Phac6g01027 538 ProSiteProfiles WRKY domain profile. 372 437 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01027 538 Pfam WRKY DNA -binding domain 378 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac6g01027 538 Pfam WRKY DNA -binding domain 216 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01027 Phac-Chr6 14338917 14342342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01027 213 537 WRKY Transcription Factor Family AT2G38470 57.550 1.29e-108 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac6g01027 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01027 K13424 - gmx:100127397 835.099