Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01010 ATGGGGGGTACCTCACCTTGTGCTTCTTGCAAGTTGCTCAGACGCCGTTGCTCCAAGGAATGCATCTTTGCTCCTTACTTTCCTTCTGATGACCCTCGCAAGTTTGCCATCGTGCATAAGGTCTTTGGTGCTAGCAATGTCAGTAAAATGCTCCAGGAGCTTCCAGTTCATCAAAGAGCAGATGCTGTGAGCAGTTTAGTTTATGAGGCAAATGCAAGAGTGAGAGATCCAGTGTATGGATGTGTTGGAGCCATATCTTACCTACAAAACCAGGTTTCACAGCTTCAAATGCAGCTTGCAGTGGCTCAAGCAGAGATTCTATGCATCCAGATGCAGCCACAAGAACCTACCTTAACAACACAAGTATACCATGATGACAAATCACTGCTCCTATCAGTACACAATAACTATGAAATTCTTCCTCAGTATCTTCACTTTCCTTCATCCTCTTCCTCCTCTTCAAATGTGCTTCAAGACCCTCATGAGTCTCTTAAGAGAGAGTCTTTTTGGACTTGA 516 0.4438 MGGTSPCASCKLLRRRCSKECIFAPYFPSDDPRKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQPQEPTLTTQVYHDDKSLLLSVHNNYEILPQYLHFPSSSSSSSNVLQDPHESLKRESFWT* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01010 171 Coils Coil 85 105 - -
Phac6g01010 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 145 - -
Phac6g01010 171 MobiDBLite consensus disorder prediction 151 171 - -
Phac6g01010 171 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Phac6g01010 171 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01010 Phac-Chr6 14202934 14204073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01010 3 131 AS2 family AT2G30130 83.582 1.37e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac6g01010 LOB 7.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01010 - - gmx:100780073 311.227