Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00981 ATGGCCTCTCAACAACAACAACACTTAATTCACATGCACTTTTTTCACTCCTATCACCAAACCTTGTTCTTACTGCTCCTTTTTTTTGCTGTTCTCATCTTTGTTCCTTCGCTCTTCTTGTGCATCCACTTCTGTCGCCGTTGTTTCTCACATCATGGAAGGTCCACACCAGCCACAGTGCTCTCTCCCCTACCTGATCTTCAATGGGTTGGAATTGAGCTAACAAACAACATCATGCTACCATCCTCAACTACCATGCTTGGTTTTCAGAAGGAAGAATGTTGCATATGTTTGAGTCTTTTCCAAGGTAATGACAAATTGAAGGTCTTGATTCAATGTAAACATGTCTTTCATTCTCACTGCTTAAACTTGTGGCTCACTGCACACCCTACTTGTCCTCTCTGCAGGGCCTCACTCCATGTCAGACAAAATCTCAACAAATAA 444 0.4234 MASQQQQHLIHMHFFHSYHQTLFLLLLFFAVLIFVPSLFLCIHFCRRCFSHHGRSTPATVLSPLPDLQWVGIELTNNIMLPSSTTMLGFQKEECCICLSLFQGNDKLKVLIQCKHVFHSHCLNLWLTAHPTCPLCRASLHVRQNLNK* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00981 147 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Phac6g00981 147 Pfam Ring finger domain 93 136 IPR001841 -
Phac6g00981 147 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 145 IPR013083 -
Phac6g00981 147 SMART ring_2 94 135 IPR001841 -
Phac6g00981 147 SUPERFAMILY RING/U-box 87 142 - -
Phac6g00981 147 PANTHER RING FINGER DOMAIN-CONTAINING 21 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00981 Phac-Chr6 13885755 13886242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00981 84 139 Rapid Response to Elicitors AT3G05200 51.786 1.20e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00981 - - gmx:102667569 191.43