Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00970 ATGGACATTGGGTTTCAAGGATCGTGGCACCCTGGGACAGTTATCCTATGTGAGGATTTGCAACGGCGTGTCAGATATAACAATATTTTGGATGACAAGGAGGCGTATTATCTTGAGGAGGTGGTGACTGTTTCAAAAGCTTTGGATGGTGATATTGAATGTGCAAACTGCTATGCACGCGGGTTCATTAGGCCATTGCCTCCTTTGGTTGAGTTTGATAGGGGGGACCTTGCATTTGGTTTGTGTGTTGATGTGAAGTACGAGGAAGCTTGGTGGGAAGGAGTTATATTTGACCACTGTGAAGGAATGGACAAGAGGAGTGTGTTTTTCCCTGATTTGGGTGATGAAATGCAGGTTGAAATTCATCAGTTACGGATTACTCAGGACTGGGATGAAATTACCGAGGAGTGGACCCGACGAGAGAACTGGGTGTTTCTTGATTTGGTTGAGGAGCAGAAGAGCAACTTGTTTGTCACAGTTTCGGCCAAGCAGATTTGGTATGATATACGCATAAAAAAGGAATTTGAGGCGATTAGAGAGTGGACATGTAATTTGAAGTACTTGTGGACTGAGTTGATAAAGGAGGTAGTTAATCACTACTTATCTCTAACGGTAAAGGAAATTATCTCTGTCTTAAACCTTCCTAGGAGTTTATTAAATGAAACACCAGAGCAGGAATTTGCTGAAGCTATGCCCAATGTTGACTTGAGCATGATCTGGCATAATAAGGAAATTGTTGTGCAGAAAGAAATTGTCCCTCCCATTATTAAAGAGACCTTACCTGACTTTCAAAATGAAATTAGCCCCTGTGGTGATAGTCCTTTTGAAGAAGAAAGTAGAGAAGATAGATCCTCAAGTCATTCAAGGTCCTCTATTTGGAAACCTGTGAAGTTGTCTGGGGTTGAATTATGCCCTGATGCTGTTAGGGAATATCCGCTTGCTTCCAAACGTAAAGTCAGGGCATTTTGGATGGATAAGTTACAAAAGCATCTTGTATGTCTTGGATGGAAGATTGTGTGGTCAAATAGATTAAATGTTCAACGTTACAAGTATATTGCCCCTTATACGCACGGTCGAAGGTATTACCTTTCACTCATTGAAGTTTGTGAAGCTTTGAAACAGGACCCTGACATGAAGTCCTTGCAACTCCAAAATGTTCGGAGTATAATGCATCCTACAGTTAATTGTCATCCTTCAGACGTGCCTTCTAATCTAGCTGAAGATATTCAGAATCTAGATATCTTTCCTCCAGGTGAAAATATTCAGAATCCAGAAATCTTTCCTCCAGCTGAAAATATTCAGAAACTAGAAATCGTTCCTCCAGCTGAAAATACTCAGAATCTAGAAATCGTTCCTCCAGGTGAAAATATTCAGATTCTAGAAACCGTTCTTCCAGCTGAAAATATTCAGAGTCTAGAAAACTTTCCTCCAGCTGAAAATGTTCAGAATCTAGAAATCGTTCCTCCAGCTGGAAATATTCAGAGTCTAGAAACCGTTCCTCCAGCTGAAAATATTCAGAGTCTAGAAAACTTTCCTCCAGCTGAAAATGTTCAGAATCTAGAAATCGTTCCTCCAGCTGAAAATATTCAGAGTCTAGAAATCGTTCCTCCAGCTGAAAATATTCAGAGCCTAGAAATCGTTCCTCCAGCTGAAAATGTTCAGAATCTAGAAATCATTCCTCCAGCTGAAAATGTTCAGAATCTAGAAATCTTTCCTCCAGCTGGAAATATTCAGAATCTAGATATCTTTTCTCCAGTTGAAGATGAAGTTGAAGATGTACCTGAGTATTGTCCCCGGGCTGTTGTGCAGTATTATCGCATGTATATATCCAATAAGAGCCGGGCTGAGAAAAAAAGATGGATACTAAAGGCAAAGAAGCATCTGTTAGCAGAGGGGTGGGTTTTTGACTATCCACCTGTATTTAATAAGAAAAGGGGAATAATATACGTGTCTCCACAAAATCGGAGATTCCCAACACTCCATGGAGCATGCAAATATTGTATTGAAGAAAGTATTCCTAATTGGGAGCTTGAATGGCAGGAGACGGATGAAGATGCTTCTAGTAGTAAATCTATTACAAATCAAAAGAAAAACAAGAGGGATTTGAAGGCCAACACACCCAAGTACCAAAGCAATGGATTGCCTCTACAGGTGCTAAGATCAAATAAGAGAGTGCAAAAGATGTCTAACCCTGCTCATTTACATCATAAGCCTCTAAATATTCCATCTTATTTGATAGACAACAACATCATCTTACCAAGGTCTAAGGTTTATTATAAGACAAAAGGCAGGCACCGTACAGTCCGAACTTTGGGTGAGGGGAAAATAAACCGTAATGGAATCAAGTGTAACTGTTGCCTTAAAATATATAGCTTTGCTGGATTCGAAAAACATGTTAGTGGCACTAGTACCTGCAGACCCTCTGCTAGTATCTTTTTGGATGATGGGAAGTCACTCTTGGACTGCCAGATACAAATGATGCAAGGTCAAAAGACAAGGGAAGCTATTGGAAAATCATTAAGTGATTTGTCTCTAGCCGAGAATGATTACATTTGTTCAGTTTGTCACTATGGTGGTGAACTTATTTTATGTGATAAATGTCCATCCTCATTCCATAAGACGTGTCTTGGTTTGGAGGATATCCCTGAAGGTGACTGGTTTTGTCCATCATGTTGTTGCGGGATTTGTAGCCAAAGGAAAATTGATGGAGATGAGATATATGAGGGTCTTCATAAATTATTAGGAGAGCCAGTTCCACTGGCTAACAATCTAACTTGGATATTGATGAAGTTTATCAACCCTAACAGTTGTGATTTTGGTAATATTGCAAGTGACTTATTGGCAGAAAGTTACTGCAAACTCAATGTTGCTCTTTCGTTGATGCATGAATGTTTTGAGCCCCTAAAGGAATCCTTGACTTGCAGAGATCTCGTGGAAGATGTTATATTCAGCAGAAGGTCAGAGCTTCATCGAATAAATTTCCAGGGTTTCTACACTGTGCTACTTGAGAGAAATGAAGAACTGGTTAGTGTGGCAACTGTTAGGGTCCATGGGAAGAAGGTAGCTGAAATACCTCTTGTTGGTACCAGATTACAGTATCGTCGACATGGAATGTGTCGCATTTTAGTAAATGAGCTTGAAAAGAAGCTCATGAAATTAGATGTTGAGAGGCTGGTTTTGCCGGCTGTACCTAGTGTGCTAGAGACATGGACCAACTCTTTTGGCTTCGCAAAGATGACTAATCATGAGAGATCTCAGTTTCTGGGCTATACTTTCCTAGATTTTGAGGGTACCATTATGTGCCAAAAGTTGTTGATGAATATTGCATCTTCAGAATCAGTTCCGTTAATAGAGTATGAACGTTGCTGTGTTAACCACAGTAAGTCTAGTCCAGTATGTGAAGTACACCAAGGAGAAGATATTGACAAAGAGACTGTTAATGTCATTGGTTCATAG 3456 0.3999 MDIGFQGSWHPGTVILCEDLQRRVRYNNILDDKEAYYLEEVVTVSKALDGDIECANCYARGFIRPLPPLVEFDRGDLAFGLCVDVKYEEAWWEGVIFDHCEGMDKRSVFFPDLGDEMQVEIHQLRITQDWDEITEEWTRRENWVFLDLVEEQKSNLFVTVSAKQIWYDIRIKKEFEAIREWTCNLKYLWTELIKEVVNHYLSLTVKEIISVLNLPRSLLNETPEQEFAEAMPNVDLSMIWHNKEIVVQKEIVPPIIKETLPDFQNEISPCGDSPFEEESREDRSSSHSRSSIWKPVKLSGVELCPDAVREYPLASKRKVRAFWMDKLQKHLVCLGWKIVWSNRLNVQRYKYIAPYTHGRRYYLSLIEVCEALKQDPDMKSLQLQNVRSIMHPTVNCHPSDVPSNLAEDIQNLDIFPPGENIQNPEIFPPAENIQKLEIVPPAENTQNLEIVPPGENIQILETVLPAENIQSLENFPPAENVQNLEIVPPAGNIQSLETVPPAENIQSLENFPPAENVQNLEIVPPAENIQSLEIVPPAENIQSLEIVPPAENVQNLEIIPPAENVQNLEIFPPAGNIQNLDIFSPVEDEVEDVPEYCPRAVVQYYRMYISNKSRAEKKRWILKAKKHLLAEGWVFDYPPVFNKKRGIIYVSPQNRRFPTLHGACKYCIEESIPNWELEWQETDEDASSSKSITNQKKNKRDLKANTPKYQSNGLPLQVLRSNKRVQKMSNPAHLHHKPLNIPSYLIDNNIILPRSKVYYKTKGRHRTVRTLGEGKINRNGIKCNCCLKIYSFAGFEKHVSGTSTCRPSASIFLDDGKSLLDCQIQMMQGQKTREAIGKSLSDLSLAENDYICSVCHYGGELILCDKCPSSFHKTCLGLEDIPEGDWFCPSCCCGICSQRKIDGDEIYEGLHKLLGEPVPLANNLTWILMKFINPNSCDFGNIASDLLAESYCKLNVALSLMHECFEPLKESLTCRDLVEDVIFSRRSELHRINFQGFYTVLLERNEELVSVATVRVHGKKVAEIPLVGTRLQYRRHGMCRILVNELEKKLMKLDVERLVLPAVPSVLETWTNSFGFAKMTNHERSQFLGYTFLDFEGTIMCQKLLMNIASSESVPLIEYERCCVNHSKSSPVCEVHQGEDIDKETVNVIGS* 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00970 1151 ProSitePatterns Zinc finger PHD-type signature. 852 891 IPR019786 -
Phac6g00970 1151 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 841 913 IPR013083 -
Phac6g00970 1151 SMART PHD_3 851 892 IPR001965 -
Phac6g00970 1151 MobiDBLite consensus disorder prediction 263 288 - -
Phac6g00970 1151 MobiDBLite consensus disorder prediction 686 707 - -
Phac6g00970 1151 ProSiteProfiles Zinc finger PHD-type profile. 849 894 IPR019787 -
Phac6g00970 1151 Pfam Agenet domain 4 68 IPR008395 -
Phac6g00970 1151 CDD PHD1_AIRE 852 891 - -
Phac6g00970 1151 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 944 1105 IPR000182 GO:0016747
Phac6g00970 1151 Pfam Tify domain binding domain 774 826 IPR032308 -
Phac6g00970 1151 Gene3D - 948 1109 - -
Phac6g00970 1151 MobiDBLite consensus disorder prediction 273 288 - -
Phac6g00970 1151 PANTHER PHD FINGER PROTEIN 12 905 1133 IPR042163 GO:0003714|GO:0045892
Phac6g00970 1151 SMART agenet_At_2 75 132 IPR014002 -
Phac6g00970 1151 CDD NAT_SF 1000 1060 - -
Phac6g00970 1151 SUPERFAMILY FYVE/PHD zinc finger 829 892 IPR011011 -
Phac6g00970 1151 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 984 1068 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00970 Phac-Chr6 13752333 13759768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00970 4 381 PHD Transcription Factor Family AT5G58610 36.070 1.93e-58 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00970 - - pvu:PHAVU_006G069100g 2009.19