Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00962 ATGGAGAAATATACTTACTTATCGAGAAAAATCGGTAATGTAATCAGCTGTAAAGAACAAATTGCAAGGCAAGGTGCCAGAGTATTTGTCGAACTTTTGTCTAATCAAGAAGGAAGGGAACAGAGTCTGCAAGCATTGTATAATTTGTCAGGATTGGATGGCAATGCGACCATCCTTATTGAGTCTTCAGTCCTTCCATCTCTTACAGAAGTTTTATTTGATAAGCAGGATCCATCTCATGAGCTGAAGTCATTGGCTGCTTCAACAATTGCGAATATTGTATCTAAGCCAGGGCATTGGGAATTAGCATCTGCTGATAATGATGGAAACCCAATGCAGTCAGAAATTATTGTTTATACACTTTTGGGGCTTTTGAACTGTCTGCCCTCTCAGTGTCAAGCCATAGTTCTTCGCATTCTTTGTGGTATTACGTTATCTCCTCAAGCATCAGAGTTAGTAGCAAGTCATATCATGTATAAGGGTGGCTTTGGAACGGTCATACCATTTCTGGAACATCCAGAAGTTGAACACAGAGTGTTTGCTTTTAAGCTTACAAGACTACTATCTGAATGGTTTAGTCAATTCATTGCAAATGAGTTGAGACTTTCAAACAAACTTCCTATACTCAAAGAAAAACTGTTAAATAACCAATCTACGAAAGGAGAAATACAGACACTTTTAGGAGGTAATTTTGTGGAATGGACTGCTGTTACTCTCAAGAACCAGCTGCGTGTTTCCAATGCAAGGTCTTCTCAGACTGCGGCTGGCATGCAGGAAGGTCTTATAGGTCTCTTGCTTCACTTCACAAGAAACCTTGATCAAGAAACTCTCAATATAATTAGAGAAAATCACCTTATGGCTATTTTCTGTGAGCAGCTGGATTATAGTTCAAAACCTAAGGTAAAACGACTAGCTGCCATTGGATTGAAAAACTTGTCAGAACTTGGAAGGTCGGATTCTGTTAGGGACTCTAAACTACCATCTTCCAGTGGATTCTGTTCCTCCCTTGTGCTTGTGTGTGGGAGAGCCTCTAGTCAACCTTCCACGTGCCCCATTCACAACCTTCCATGCAATAAAGATATTCAGTTGTGCCTGCTCAAGAGCAGAAGTATCAAACCCCTGGTTGATATCCTCAATGATAGTGACACCGATGTTCAGCTAGCTGCAGTGGATGCACTTTCTACTCTAGTACTAGATCACACATCTCGCATTTTCAAAAGAGTTGTTGATGAGCTTGAACATTTGGGTGCAGTTGATGCTCTTACCACTCTTTTTACAGAAGTTAGATCTGAGGAGCTTCGGGAGAAGGCAATTTGGATGATCGAAAAGATATTGAGAGTGGAAAATATCAGCAATCGGCATGCACTCAATCATTCTCTTGTGAGAGCTTTGGTTGAAGCCTTTAAGCATGGCAATACCAAGACAAGGAAACATGCTCAAGATGCTCTTACCCTCCTAAAGCAGTTATCCGAAGTTAGTGGAAAGACATCAAGTCAAACTCGAGTAAAGAGATAG 1515 0.4073 MEKYTYLSRKIGNVISCKEQIARQGARVFVELLSNQEGREQSLQALYNLSGLDGNATILIESSVLPSLTEVLFDKQDPSHELKSLAASTIANIVSKPGHWELASADNDGNPMQSEIIVYTLLGLLNCLPSQCQAIVLRILCGITLSPQASELVASHIMYKGGFGTVIPFLEHPEVEHRVFAFKLTRLLSEWFSQFIANELRLSNKLPILKEKLLNNQSTKGEIQTLLGGNFVEWTAVTLKNQLRVSNARSSQTAAGMQEGLIGLLLHFTRNLDQETLNIIRENHLMAIFCEQLDYSSKPKVKRLAAIGLKNLSELGRSDSVRDSKLPSSSGFCSSLVLVCGRASSQPSTCPIHNLPCNKDIQLCLLKSRSIKPLVDILNDSDTDVQLAAVDALSTLVLDHTSRIFKRVVDELEHLGAVDALTTLFTEVRSEELREKAIWMIEKILRVENISNRHALNHSLVRALVEAFKHGNTKTRKHAQDALTLLKQLSEVSGKTSSQTRVKR* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00962 504 SUPERFAMILY ARM repeat 25 399 IPR016024 -
Phac6g00962 504 Gene3D - 352 501 IPR011989 -
Phac6g00962 504 SMART arm_5 273 314 IPR000225 GO:0005515
Phac6g00962 504 SMART arm_5 13 51 IPR000225 GO:0005515
Phac6g00962 504 SMART arm_5 52 95 IPR000225 GO:0005515
Phac6g00962 504 SMART arm_5 405 446 IPR000225 GO:0005515
Phac6g00962 504 SMART arm_5 358 398 IPR000225 GO:0005515
Phac6g00962 504 Gene3D - 9 317 IPR011989 -
Phac6g00962 504 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 17 494 - -
Phac6g00962 504 SUPERFAMILY ARM repeat 358 486 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00962 Phac-Chr6 13681661 13684388 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00962 39 494 U-box Gene Family AT1G76390 27.479 2.38e-36 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00962 - - gmx:102659945 802.357