Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00957 ATGACAAAATCCTCTTATAAAGCGACAATCTCCGACATCTTCATTACTTCACTCACTATCCCAGTCGTAGCGGCGAAACGGAGATCACAGATGGCAAAAACGACGTCGTTGCTGTTCTGTACGCTGCTCCTCTTTGGAACCCTAGCTCTCATTCAGGCGAAGAAATCAAAGGAGGAATTGAAGGAAATCACCAACAAGGTTTTCTTTGATATTGAGATCGATGGAAAAGCCGCAGGTCGTATTGAAATCGGTCTTTACGGGAAGGCAGTTCCAAAAACTGCAGAAAACTTCCGAGCTCTTTGCACAGGGGAAAAGGGAATTGGTAAAAGTGGAAAGCCTCTCCATTACAAAGGTAGCTCATTCCACAGAATTATTCCTAGCTTTATGATCCAAGGAGGTGATTTTACACATGGCAATGGAATGGGCGGAGAATCAATTTACGGAGAGAAGTTTGCTGATGAGAACTTCAAGTTAAAGCATACTGGACCAGGATTGCTGTCAATGGCAAACGCAGGTCCTGATACCAACGGTTCACAATTTTTCATCACAACTGTGACAACTAGCTGGTTGGACGGAAAGCATGTTGTTTTTGGTAAAGTTATTTCTGGAATGGATGTTGTTTACAAGGTTGAAGCGGAAGGAAGGCAAAGTGGCACTCCCAAGAGCAAGGTTGTGATTGTTGACAGCGGTGAACTTCCTCTATAA 705 0.4369 MTKSSYKATISDIFITSLTIPVVAAKRRSQMAKTTSLLFCTLLLFGTLALIQAKKSKEELKEITNKVFFDIEIDGKAAGRIEIGLYGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRIIPSFMIQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGKHVVFGKVISGMDVVYKVEAEGRQSGTPKSKVVIVDSGELPL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00957 234 FunFam Peptidyl-prolyl cis-trans isomerase 60 233 - -
Phac6g00957 234 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 116 133 IPR020892 GO:0003755|GO:0006457
Phac6g00957 234 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 66 232 - -
Phac6g00957 234 SUPERFAMILY Cyclophilin-like 62 232 IPR029000 -
Phac6g00957 234 CDD cyclophilin_ABH_like 66 230 - -
Phac6g00957 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Phac6g00957 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 IPR002130 GO:0000413|GO:0003755
Phac6g00957 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 179 191 IPR002130 GO:0000413|GO:0003755
Phac6g00957 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 164 179 IPR002130 GO:0000413|GO:0003755
Phac6g00957 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 192 207 IPR002130 GO:0000413|GO:0003755
Phac6g00957 234 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 68 231 IPR002130 GO:0000413|GO:0003755
Phac6g00957 234 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 69 229 IPR002130 GO:0000413|GO:0003755
Phac6g00957 234 Gene3D - 52 233 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00957 Phac-Chr6 13567739 13570716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00957 79 229 U-box Gene Family AT5G67530 43.791 2.74e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00957 K01802 - gmx:100305485 366.696