Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00947 ATGTCACACCACACCATGGAGGAGGACTTAAACATCTTGGAGATGAACACTGAGCCTTGTAACAACAGCAATGCTACATGTGCAAAGACAGCACCACCACAGGCTCATAACAACCTCACATCTTCAACTGTAACAAAGAAATATCCATTTCTGGTCACCAAAGTTCACTGCCAAATGCTAAGGAGTTTCACAGCCAATTTGAAAGAGGTTGTTTTTGGCACTAAGCTTGCAGTGCTTTTTCCTGCTGTCCCTTTAGCTGTTGTTGCAGATTTTTATAGCCTTGGAAGGCCTTGGATTTTTGCTTTGAGCCTGCTTGGACTCACCCCGCTAGCTGAACGTGTCAGCTTCCTAACTGAGCAAATTGCGTATTACACTGGCCCCACAGTTGGAGGGCTTCTAAATGCAACCTGTGGTAATGCAACTGAGATGATCATATCCTTGCTAGCACTTCACCAAAACAAAGTAAATGTTGTGAAGTTCTCCCTGCTGGGTTCCATTCTCTCAAACCTTCTATTAGTTCTTGGAAGTTCACTCCTTTGTGGAGGCTTAGCCAACCTTAGGAAGGAGCAAATATATGACAGAAAACAAACAGATGTAAACTCACTGGTTTTGTTGCTGGGGTTGCTGTGCCATTTGCTGCCATTAATGTTCAGATATGCCATAGCAGAAGAATATCCTTCAATAGCAACTAGCACTCTACAATTGTCCAGAGCAAGCAGCATTGTTATGCTTCTTGCATATGCCGGATACATCTTCTTTCAATTAAAAACACATCGACAATTTTTTGATGGGCAAGAGGAAGATGAAAACGAAGAAGAGAAGGCTGTGATAGGATTTTGGAGTGCATTTACTTGGTTGGTTGGTATGACACTTATCATATCTCTGCTTTCTGAATATGTTGTGGCAACCATTGAGGCTGCTTCAGATTCCTGGGGCATTTCTGTTAGCTTCATTAGCATAATTTTGTTACCAATTGTGGGAAACGCTGCAGAGCATGCTGGCTCAATCATTTTTGCTTTTAAGAACAAGTTGGACATATCATTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTGAGGCTAAACTATTATGAGTTGTGTGTATAA 1119 0.4182 MSHHTMEEDLNILEMNTEPCNNSNATCAKTAPPQAHNNLTSSTVTKKYPFLVTKVHCQMLRSFTANLKEVVFGTKLAVLFPAVPLAVVADFYSLGRPWIFALSLLGLTPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIISLLALHQNKVNVVKFSLLGSILSNLLLVLGSSLLCGGLANLRKEQIYDRKQTDVNSLVLLLGLLCHLLPLMFRYAIAEEYPSIATSTLQLSRASSIVMLLAYAGYIFFQLKTHRQFFDGQEEDENEEEKAVIGFWSAFTWLVGMTLIISLLSEYVVATIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVRLNYYELCV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00947 372 NCBIfam calcium/proton exchanger 81 363 IPR004798 GO:0006816|GO:0015369
Phac6g00947 372 FunFam Vacuolar cation/proton exchanger 127 272 - -
Phac6g00947 372 Pfam Sodium/calcium exchanger protein 282 363 IPR004837 GO:0016020|GO:0055085
Phac6g00947 372 Pfam Sodium/calcium exchanger protein 98 255 IPR004837 GO:0016020|GO:0055085
Phac6g00947 372 Gene3D - 127 276 IPR044880 -
Phac6g00947 372 Gene3D - 277 368 IPR044880 -
Phac6g00947 372 NCBIfam calcium/proton exchanger 62 365 - -
Phac6g00947 372 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 43 364 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00947 Phac-Chr6 13543195 13546760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00947 16 365 Antiporters AT2G38170 63.128 5.63e-148 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00947 K07300 - gmx:100778821 570.081