Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00946 ATGTCACACCACACCATGGAGGAGGACTTAAACATCTTGGAGATGAACACTGAGCCTTGTAACAACAGCAATGCTACATGTGCAAAGACAGCACCACCACAGGCTCATAACAACCTCACATCTTCAACTGTAACAAAGAAATATCCATTTCTGGTCACCAAAGTTCACTGCCAAATGCTAAGGAGTTTCACAGCCAATTTGAAAGAGGTTGTTTTTGGCACTAAGCTTGCAGTGCTTTTTCCTGCTGTCCCTTTAGCTGTTGTTGCAGATTTTTATAGCCTTGGAAGGCCTTGGATTTTTGCTTTGAGCCTGCTTGGACTCACCCCGCTAGCTGAACGTGTCAGCTTCCTAACTGAGCAAATTGCGTATTACACTGGCCCCACAGTTGGAGGGCTTCTAAATGCAACCTGTGGTAATGCAACTGAGATGATCATATCCTTGCTAGCACTTCACCAAAACAAAGTAAATGTTGTGAAGTTCTCCCTGCTGGGTTCCATTCTCTCAAACCTTCTATTAGTTCTTGGAAGTTCACTCCTTTGTGGAGGCTTAGCCAACCTTAGGAAGGAGCAAATATATGACAGAAAACAAACAGATGTAAACTCACTGGTTTTGTTGCTGGGGTTGCTGTGCCATTTGCTGCCATTAATGTTCAGATATGCCATAGCAGAAGAATATCCTTCAATAGCAACTAGCACTCTACAATTGTCCAGAGCAAGCAGCATTGTTATGCTTCTTGCATATGCCGGATACATCTTCTTTCAATTAAAAACACATCGACAATTTTTTGATGGGCAAGAGGAAGATGAAAACGAAGAAGAGAAGGCTGTGATAGGATTTTGGAGTGCATTTACTTGGTTGGTTGGTATGACACTTATCATATCTCTGCTTTCTGAATATGTTGTGGCAACCATTGAGGCTGCTTCAGATTCCTGGGGCATTTCTGTTAGCTTCATTAGCATAATTTTGTTACCAATTGTGGGAAACGCTGCAGAGCATGCTGGCTCAATCATTTTTGCTTTTAAGAACAAGTTGGACATATCATTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTAGTTGTTGCATGGATAATGGGTATAGAAATGGACTTGGATTTCAATCTCCTTGAAACCGGGTGTCTTGCTTTTACAATTATTGTTACAGCATTCACTTTGCAGGATGGAACTTCACACTACATGAAAGGAGTGGTTCTTTTCCTGTGTTACATTATCATTGCTGCATGCTTTTTTGTTCAGAAAACTCCACTAATTAATGAAGCATAG 1308 0.4121 MSHHTMEEDLNILEMNTEPCNNSNATCAKTAPPQAHNNLTSSTVTKKYPFLVTKVHCQMLRSFTANLKEVVFGTKLAVLFPAVPLAVVADFYSLGRPWIFALSLLGLTPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIISLLALHQNKVNVVKFSLLGSILSNLLLVLGSSLLCGGLANLRKEQIYDRKQTDVNSLVLLLGLLCHLLPLMFRYAIAEEYPSIATSTLQLSRASSIVMLLAYAGYIFFQLKTHRQFFDGQEEDENEEEKAVIGFWSAFTWLVGMTLIISLLSEYVVATIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIEMDLDFNLLETGCLAFTIIVTAFTLQDGTSHYMKGVVLFLCYIIIAACFFVQKTPLINEA* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00946 435 FunFam Vacuolar cation/proton exchanger 127 271 - -
Phac6g00946 435 Gene3D - 127 276 IPR044880 -
Phac6g00946 435 Gene3D - 277 426 IPR044880 -
Phac6g00946 435 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 43 429 IPR004713 GO:0006812|GO:0008324|GO:0016020
Phac6g00946 435 FunFam Vacuolar cation/proton exchanger 272 426 - -
Phac6g00946 435 Pfam Sodium/calcium exchanger protein 98 255 IPR004837 GO:0016020|GO:0055085
Phac6g00946 435 Pfam Sodium/calcium exchanger protein 282 423 IPR004837 GO:0016020|GO:0055085
Phac6g00946 435 NCBIfam calcium/proton exchanger 62 425 - -
Phac6g00946 435 NCBIfam calcium/proton exchanger 81 425 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00946 Phac-Chr6 13543195 13546760 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00946 16 430 Antiporters AT2G38170 64.775 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00946 K07300 - gmx:100778821 702.59