Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00936 ATGAGGATATCTTACAGTTCAGCAGCCCCTATTTTTCTATTTCTTCTTCAATGGACTGATTACCGCTTGGCTGGTGCTCTGGGTTTGCTGAGAGTTCTAATTTATGTGAGTTATGGAAATGGGAAGAATACTATGTCAGTATATGAAAGGAAAGCAAGCATTAGACAATTTTACTCTGTTATATTTCCTGCTCTGTTGCAACTTGAGAAAGGCATCACGGATTTGGAGGAAAGGAAACAGAAAGAAGTCGCTCTTAGGTACAAAGGAAAGAGTGGCTTCATGGAGAGAGAACAATCTGATGTTGACATTGAAAGAGAAGAGGAATGTGGAGTTTGCTTGGAGGTGAAAGCTAAAGTTGTGTTGCCTGATTGCTGCCACTATATGTGTTTGAAGTGCTACAGAGATTGGTAA 411 0.4015 MRISYSSAAPIFLFLLQWTDYRLAGALGLLRVLIYVSYGNGKNTMSVYERKASIRQFYSVIFPALLQLEKGITDLEERKQKEVALRYKGKSGFMEREQSDVDIEREEECGVCLEVKAKVVLPDCCHYMCLKCYRDW* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00936 136 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 136 IPR013083 -
Phac6g00936 136 SUPERFAMILY RING/U-box 96 136 - -
Phac6g00936 136 ProSitePatterns Zinc finger RING-type signature. 124 133 IPR017907 -
Phac6g00936 136 PANTHER RING FINGER PROTEIN 41, 151 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00936 Phac-Chr6 13495924 13499542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00936 59 136 C2H2 Transcription Factor Family AT5G39550 26.250 1.66e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00936 - K25840 gmx:100808567 242.662