Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00935 ATGGCGGTTTCATGGGAAGAGAGTGTGACTTATTCCATCAACGCAATCTACCTTCTCTTCTCAGCGTACCTTGTCTTTGTGATGCAAATTGGGTTTGCCATGATATGTGCAGGTTCAGTGCGTGCCAAAAATGCAATGAACATAATGCTCACCAACGTGGTTGATGCAGTGGTTGGTAGCATCTCCTTCTACCTCTTTGGTTTTGCATTTGCATATGGCACTTCCAACCCTTTCATTGGCTCCAATTTGTTTGCTCTAGCCCACATTCCAAATGGCACTTACGACTATGCTTTCTTCCTTTACCAATGGGCTTTTGCTATAGCTGTAACAGGCATCACAAGTGGATCCATAGCTGAGAGAACTCAATTCAGTGCCTATCTTGTTTTCTCATTTTTCCTCAGTGGCTTCGTCTACCCGGTTGTTGTCCATTGGGTCTGGTCATCAAGTGGTTGGCTCAGTCCAAGTTCAACTCCCTTGATGTTGGGCTCAGGAGCAATTGACTTTGCTGGGAGTGGAGTGGTGCATTTGGTTGGTGCAGTTGCTGGGCTTTGGGGCTCCATCATAGAAGGCCCACGGGCCGGCCGATTTGATGCTTTAGGCAGGCCCGTGCCTCTAAGAGGCCATAGTGCAACACTTGTTGTACTTGGGACCTTTTTGTTGTGGTTTGGTTGGTTTGGATTTAATCCTGGATCCTTTGACAAGATCCTTGTGGCCTATCCCGGCACGTCGGATCAAGGTAATTGGACGTCGGTCGGACGGACTGCCGTCACAACCATATTAGCTGGTTCGACGGCCGGGATAGTCACCTTGTTTGGCCGACGGTTGTTAGTCGGCCACTGGGATGCAATGGATGTGTGCAATGGCTTGCTTGGTGGGTTTGTTTCCATTACCTCCGGATGCTCAGTTGTTGAGCCATGGGCTGCCATTATTTGCGGGTTTGTGTCGGCTTGGGTTCTAATTGGGCTGAACATTGTGGCCCTAAAATTGAACTATGATGATCCATTAGAGGCAGCCCAATTGCATGGGGGGTGTGGTACTTGGGGTTTGTTGTTTACTGGGTTGTTTGCCAAAGAGGAGTTTGTGATCCAAGTGTATAATTGTGGTGAGATTGGGGTTTCAAGGCCCTATGGTCTCCTACTTGGAGGTGGATGGGGATTGATTGGAGCCCAAGTGATTGAGATTTTGACAATCTTTGGATGGGTAAGTGTAACAATGGGGCCCATATTCTATGCCTTGCACAAGCTTGAGTTATTGAGAATTCCTGTTAATGAGGAAGTTACTGGCCTTGATATTTCTTGTCATGGAGGCTATGCTTATGCTCAAGAAAATCATCATCTCAGACTTTACGGAGATTATATGCCTATTCAATATGGCCTATCTTAG 1383 0.4714 MAVSWEESVTYSINAIYLLFSAYLVFVMQIGFAMICAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGTSNPFIGSNLFALAHIPNGTYDYAFFLYQWAFAIAVTGITSGSIAERTQFSAYLVFSFFLSGFVYPVVVHWVWSSSGWLSPSSTPLMLGSGAIDFAGSGVVHLVGAVAGLWGSIIEGPRAGRFDALGRPVPLRGHSATLVVLGTFLLWFGWFGFNPGSFDKILVAYPGTSDQGNWTSVGRTAVTTILAGSTAGIVTLFGRRLLVGHWDAMDVCNGLLGGFVSITSGCSVVEPWAAIICGFVSAWVLIGLNIVALKLNYDDPLEAAQLHGGCGTWGLLFTGLFAKEEFVIQVYNCGEIGVSRPYGLLLGGGWGLIGAQVIEILTIFGWVSVTMGPIFYALHKLELLRIPVNEEVTGLDISCHGGYAYAQENHHLRLYGDYMPIQYGLS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00935 460 PANTHER AMMONIUM TRANSPORTER 11 436 - -
Phac6g00935 460 Gene3D Ammonium transporter AmtB like domains 3 452 IPR029020 -
Phac6g00935 460 NCBIfam ammonium transporter 14 439 IPR001905 GO:0008519|GO:0016020|GO:0072488
Phac6g00935 460 ProSitePatterns Ammonium transporters signature. 167 192 IPR018047 GO:0008519|GO:0016020|GO:0072488
Phac6g00935 460 FunFam Ammonium transporter 1 449 - -
Phac6g00935 460 SUPERFAMILY Ammonium transporter 11 420 - -
Phac6g00935 460 Pfam Ammonium Transporter Family 17 439 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00935 Phac-Chr6 13493911 13495396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00935 7 444 Inorganic Solute Cotransporters AT1G64780 65.393 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00935 K03320 - pvy:116129597 742.265