Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00900 ATGGCATCATCCATTAACACCTTCTTCAACAAGTTCCTCTATCTCCTCATCCTCTTGGTCCACCTTGGCTGCTTCATCTTCACCACCACCACCGCCGGAGGAAAAAAAGCACCACTGTCAAAGAAACGCAAAATCTTACCTTCATCCCAACCCTGCTCCCCTTCCCACCCAAAATTCAAAACCCACAAAGCCCTGTCCTCTTCTTGGCATTTCATCAAACACCTCCTTTCCACCAAGTCCTGCAAAACCCCCAAAACTGTCACCGCCCAATCCTCCCCTCAATCCACCGCCACTGCCTCCACAACCACTGTCTCCGCCGCTGCAGCGCGCTCCCTCGTTTCACTAACACAACCCGACCCGGACAGAAAACCACCCGGGTCGTGTCCCGAATCCGACATCTCCGCCGACACCAACCTCTTCTTCCCTCTCCGCAACGACATATTCCCCTGCACCGCGTGCGGCGAGATCTTCCAGAAACCCCACCTCTTGGAAACCCACCAAACCCTCAAGCACGCGGTCTCGGACCTGTCCGGATCCGACCCGGGTCACAACATCGTCCAGATAATCTTCAAATCGGGTTGGCCCGAATCCAAACCCTCCCCTACCATAACCCGCATCCTCAAGATCCACAACAGCCCGAAGATCCTCGCGAAGTTCGAGGAGTACCGCGAGGTTGTCAAGTCCAAAGCGGCGCGTCACGGAGCCCTCACGCGCCGCCGAGACGAGCGCTGCATTGCCGACGGCAACGAACTCATGCGATTTCACTGCTCCACGTTTCTATGCGACTTGGGACACAGTGGGGATTCCTCAATTTGTTCGCAGCAATTTTGTAATATATGTGGAATTATTAAGTCAGGGTTTTCCCCGAAACTCGACGGAATTGCCACGCTGTCCACCAGCTGGCGGGCACACGTGGCTATCCCGGATGACGTGGAACGAGAATTCAGCTTCATGAATGTCAAACGGGCCATGCTCGTTTGTAGGGTCATTGCGGGTCGGGTTGGATCCGATTCAGACGACGCCGAAAAAGCTGATGGAGGTTTTGATTCGGTAATGGCGAGGCCAGATACTGGGGTTTACACCCGGCTCGATGAGGAGGAGTTGTTGGTGTTTAATCCTAGGGCTGTTCTTCCTTGCTTTGTGATTGTGTATAGTGTCTGA 1161 0.5418 MASSINTFFNKFLYLLILLVHLGCFIFTTTTAGGKKAPLSKKRKILPSSQPCSPSHPKFKTHKALSSSWHFIKHLLSTKSCKTPKTVTAQSSPQSTATASTTTVSAAAARSLVSLTQPDPDRKPPGSCPESDISADTNLFFPLRNDIFPCTACGEIFQKPHLLETHQTLKHAVSDLSGSDPGHNIVQIIFKSGWPESKPSPTITRILKIHNSPKILAKFEEYREVVKSKAARHGALTRRRDERCIADGNELMRFHCSTFLCDLGHSGDSSICSQQFCNICGIIKSGFSPKLDGIATLSTSWRAHVAIPDDVEREFSFMNVKRAMLVCRVIAGRVGSDSDDAEKADGGFDSVMARPDTGVYTRLDEEELLVFNPRAVLPCFVIVYSV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00900 386 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 68 384 - -
Phac6g00900 386 SUPERFAMILY ADP-ribosylation 175 385 - -
Phac6g00900 386 ProSitePatterns Zinc finger C2H2 type domain signature. 150 171 IPR013087 -
Phac6g00900 386 Gene3D - 171 385 - -
Phac6g00900 386 ProSiteProfiles Zinc finger C2H2 type domain profile. 148 172 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00900 Phac-Chr6 13237561 13239770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00900 69 386 C2H2 Transcription Factor Family AT2G29660 55.183 3.20e-110 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac6g00900 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00900 - - var:108341815 697.197