Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00896 ATGAAAAGTATAGGAGGAGGTGGTGCCATTATTCCAGTTAATGGATGTGGAAATATAAAGGCCTCTAACCCTTCCAAGTGTTCTGTTGGTCCTCCTTTGACAGCCATAGAAAGGTTTTTGTGGGCACAACAAAGTCATACTACTCAGCAATCGCCACAGAATGTTGCAAACAAAATCCATGCAAGTGCTTTGGATGGTTTTGGTGGCTCAACCTACAACATTGTGTGGCATAATGGTGCTATGGAAGTGAACTTTGTTGAACAGCTTTTAACAAATGAAGTGGCTCTGAATTGGACACAACAAGTCCCTCCACTGTGCTTGAAGGAAGATTTGCATGTGTCAGGGAAGAACCGAAAAAGGGTGGGACGCAGACCTAAGGAAGGGTCTTCTGTGCCTTTGATCAAAGGCCAGTGGACTGAAGAAGAAGACAGGAAACTGGTAAAGTTGGTGAAACAACATGGTACAGGCAAATGGTCTCAGATAGCTGAAAAGTTGGATGGAAGGGCTGGAAAGCAGTGTCGAGAGAGATGGCATAATCATCTGCGACCTGATATTAAGAAAGATGCTTGGAGTGAGGAAGAAGAAAGGATATTAGTCCAATATCATGCCAAGCTTGGAAACCGCTGGGCAGAGATTGCAAAGCAAATGAAAGGAAGAACTGAAAATGCCATAAAAAACCATTGGAATGCCACCAAGAGGAGACAAAACTCAAGAAGAAAGAACAAAAGAGCAGGAATCGCAAATGGAAAGCCATTGTCCTCTATTCTGCAGGACTACATCAAAAGTTTGACTCTCACCAACACTTCAATTCCCTCTGTGGAACAAACATTAGCACCCCAACACTTGGCTGATATGGTTGTTACCAATGACAACTTCTCACTTATGTCTGAGTCCTATGATGATGAGATGTTCATCATGCAACAACTTTTGGATCAGAATAATGTCATTGTTGAATCTGTCAAGCAGACCAAGAATATCAATAACTCTTCTGCAGCCTTTGATGGTTATCATAATCAAACTAGTAACAGTAGTCAGTTTCTCACTGAAGTCACTCAATCAGGGTCTGTTCATTCCAACCTAACAAACTCACACATGTCCTTCGATGAGAGTCTTTTCCACTCTAAAAGGACTCCTACTGCTGTCAGCTACCTTGATTTTGATGTCTGTCTCTCTCATTTACATAATGGAAATTCTGGTTCATCATTTTTCAACAATAATGGGATTCACAACCAGAACATGGAGTTGCATTTGGGGAAGCAAGATTGGTTACTTGGAAAGAGAGATTGGGATATAGGAGAGTCGATTTCTTCTACTTGTCAGTTTTTGCACCAGTAA 1335 0.4157 MKSIGGGGAIIPVNGCGNIKASNPSKCSVGPPLTAIERFLWAQQSHTTQQSPQNVANKIHASALDGFGGSTYNIVWHNGAMEVNFVEQLLTNEVALNWTQQVPPLCLKEDLHVSGKNRKRVGRRPKEGSSVPLIKGQWTEEEDRKLVKLVKQHGTGKWSQIAEKLDGRAGKQCRERWHNHLRPDIKKDAWSEEEERILVQYHAKLGNRWAEIAKQMKGRTENAIKNHWNATKRRQNSRRKNKRAGIANGKPLSSILQDYIKSLTLTNTSIPSVEQTLAPQHLADMVVTNDNFSLMSESYDDEMFIMQQLLDQNNVIVESVKQTKNINNSSAAFDGYHNQTSNSSQFLTEVTQSGSVHSNLTNSHMSFDESLFHSKRTPTAVSYLDFDVCLSHLHNGNSGSSFFNNNGIHNQNMELHLGKQDWLLGKRDWDIGESISSTCQFLHQ* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00896 444 Pfam Myb-like DNA-binding domain 138 195 - -
Phac6g00896 444 CDD SANT 138 181 IPR001005 -
Phac6g00896 444 SUPERFAMILY Homeodomain-like 132 228 IPR009057 -
Phac6g00896 444 ProSiteProfiles Myb-like domain profile. 182 232 IPR001005 -
Phac6g00896 444 Gene3D - 134 186 - -
Phac6g00896 444 SMART sant 186 234 IPR001005 -
Phac6g00896 444 SMART sant 134 183 IPR001005 -
Phac6g00896 444 Gene3D - 189 247 - -
Phac6g00896 444 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 185 IPR017930 -
Phac6g00896 444 ProSiteProfiles Myb-like domain profile. 135 181 IPR001005 -
Phac6g00896 444 FunFam Transcriptional activator Myb isoform A 134 187 - -
Phac6g00896 444 CDD SANT 189 232 IPR001005 -
Phac6g00896 444 PANTHER MYB PROTEIN-RELATED 120 324 - -
Phac6g00896 444 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 186 236 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00896 Phac-Chr6 13216791 13219219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00896 29 400 MYB Transcription Factor Family AT5G58850 38.931 7.66e-71 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac6g00896 Myb_DNA-bind_6 2.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00896 K09422 - gmx:100786295 491.886