Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00893 ATGCTCGCAATTTGGCGCGCTTGTATAAACCTTTTCCCGCTAAAGAAAGCTTATAGATCTCTTCTCTTCTCCATTTCTGCATTGCAGAATCGCATTTTCTTCTTCAACCTTCAAATTCATCTTCATTGTTTTCCCACTCTCGCTTCAAAAATGCCAGTTATCGCCGCAAAACGCTCGTTGCGATCTCACCCTTCATCGCCTCCCCGCAAATCCCCCCGCCGATGCAAAGCGGCAACCGCCAATTCCTCCCCCAGTGTAAACAAGTTCGGTACCGATGAAAACCAAGCGGATCCGGAAGCTGTGAAACCCAAGTGGAATCCCAAAGGTTTGCAGGTAAACAAGTTTGGTACCGATGAAAACCAAGAGGATCCAGAAGCTGTGAAACCCAAGTGGAATCCCAAAGATGGCGAGCAAATGAAGGCGGTGAAGCTGGCATTGCACTTGTCTACTGCGCCGTGTTCGGTTGTGTGCCGTGAGGAGGAGCAGAATGTTGTTTTGGAGTTCTGCAAAGGGTGCGTTGAGCATAAAAAGGCTGGGAGTCTGTACATATGTGGGTGTCCCGGAACCGGGAAATCGTTGTCTATGGAGAAAGTGAAGGAACAATTACTCAATTGGGCTAAGGAGGCAGGTCTCCCGCTGCCAGATGTTTTATCTGTAAGCTGTACAACTCTTGCCAACACATCGGATATTTTCACAAAGATGCTTGGGTTGAACCAAAAACAGGGTAAAAAGGTTTCAGCCTCGCCCCTACAGCAACTTCAGAACATGTATTCTCAGAAATCATCTATCAAGAACATGACGTTGATAGTAGCTGACGAATTAGATTATTTGATAACCAAAGACAGAGCCGTGCTTCATGAACTTTTCATGCTCACCACCTTTCCTTTTTCTAGATGTATATTAATAGGTGTAGCGAATGCAATTGACTTAGCTGATCGATTTCTTCCAAGGCTTACATCATTAAATTGCAAGCCTGTTGTTGTAAATTTCCAGGCTTACTCGAAAGATCAGCTCCTCAAGATTCTTGAAGAAAGGTTAAAAGAACTTCCTTACACCGTCTTTCAACAGCCAGCCCTGGAACTATGTGCTAGGAAAGTTGCCGCAGCTACTGGAGACATGCGGAATGCGCTTTCTATATGCTGGAGTGCAATTGAGATGCTTGAAGCAGAAATTAGAGAATCTGCCTGCAATTTGAGTAATTCATTGGAAGAGATATCATTCTCCAAACAAAATCTCCCCACAGCTCCTGATTTTATGAAAAAACGTGAATTTGATACTGTAAGGACTGATCATATGGCTCGTGCCTTGTCCAAGACTTATAGATCACCGGTGGTGGATACGATACAATCTCTGCCACATCATCAGCAGATTATACTCTGCTCTTCTATGAATCACTTTCGTGGAGCCAAGAAAGATACAATCCTCGGAGAGTTGTATAAATCGTATGCGGGGATATGCAGATCATCTTTAATTCCTCCTGCAGGAATCTTAGAATTTTCAAACATGTGCAGAGTGCTAAGTGACCAGGGTCTTATTAAAGTAGGACAATCTCGAGAGGATAAATTAAGAAGAGTGTCGCCCAAAGTAAATGAGGGTGATATTACTTTTGCATTGCAGGGAATACGGTTTTTTCAAAACTGTCTTAAATGA 1650 0.4358 MLAIWRACINLFPLKKAYRSLLFSISALQNRIFFFNLQIHLHCFPTLASKMPVIAAKRSLRSHPSSPPRKSPRRCKAATANSSPSVNKFGTDENQADPEAVKPKWNPKGLQVNKFGTDENQEDPEAVKPKWNPKDGEQMKAVKLALHLSTAPCSVVCREEEQNVVLEFCKGCVEHKKAGSLYICGCPGTGKSLSMEKVKEQLLNWAKEAGLPLPDVLSVSCTTLANTSDIFTKMLGLNQKQGKKVSASPLQQLQNMYSQKSSIKNMTLIVADELDYLITKDRAVLHELFMLTTFPFSRCILIGVANAIDLADRFLPRLTSLNCKPVVVNFQAYSKDQLLKILEERLKELPYTVFQQPALELCARKVAAATGDMRNALSICWSAIEMLEAEIRESACNLSNSLEEISFSKQNLPTAPDFMKKREFDTVRTDHMARALSKTYRSPVVDTIQSLPHHQQIILCSSMNHFRGAKKDTILGELYKSYAGICRSSLIPPAGILEFSNMCRVLSDQGLIKVGQSREDKLRRVSPKVNEGDITFALQGIRFFQNCLK* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00893 549 MobiDBLite consensus disorder prediction 114 133 - -
Phac6g00893 549 Pfam AAA domain 176 293 IPR003593 GO:0016887
Phac6g00893 549 SMART Cdc6_C_2 459 538 IPR015163 -
Phac6g00893 549 Gene3D - 448 532 IPR036388 -
Phac6g00893 549 FunFam Cell division control protein 451 541 - -
Phac6g00893 549 CDD AAA 161 319 - -
Phac6g00893 549 PIRSF Cdc6 44 549 IPR016314 GO:0006270|GO:0051301
Phac6g00893 549 CDD Cdc6_C 452 534 IPR015163 -
Phac6g00893 549 Pfam CDC6, C terminal winged helix domain 459 537 IPR015163 -
Phac6g00893 549 MobiDBLite consensus disorder prediction 58 108 - -
Phac6g00893 549 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 78 547 - -
Phac6g00893 549 MobiDBLite consensus disorder prediction 118 133 - -
Phac6g00893 549 SUPERFAMILY "Winged helix" DNA-binding domain 444 547 IPR036390 -
Phac6g00893 549 Gene3D - 136 323 IPR027417 -
Phac6g00893 549 Gene3D - 324 447 - -
Phac6g00893 549 MobiDBLite consensus disorder prediction 76 92 - -
Phac6g00893 549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 393 IPR027417 -
Phac6g00893 549 Coils Coil 384 404 - -
Phac6g00893 549 FunFam Cell division control protein 136 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00893 Phac-Chr6 13165584 13171026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00893 70 548 Core DNA Replication Machinery Family AT2G29680 57.992 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00893 K02213 - gmx:100791200 817.379