Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00878 ATGGACAAGCACTGGAGCTCTCGCCAAACGTTTGAACGCTACATTTATGATTATCTTGTCAAACGAAACATGCACCACACTGCTGAGATTTTCAGGAACGAGGCTGAACTTCCGCCGGATTCCGCCTCTGCTGCTTCCCGCGATGCTGTGGATGTCCCGGAAGGATTTTTGCTGGAGTGGTGGTCTATCAACAGTGATTTTGAGTTCTTCAAACAAATGCATTTGCAGGACAAAGAGGGGTTGTTAGGAGGAAAGCAAGGTTGTAATGCTTTTCAAGAAGTAGGGTCTTCCATGAATGCAGAACCAATGTATCAATTGCCTAAAAATTTTACTCCTGTTGGAGCACTCAACAGAGGAAGCAACTTGATGCCATCACATGTACCTTGTGGATGGCCAGTATTTTCCTCACCATCTGCACACCAAAAAGTAAGTGGTGAAATGCCACAATTTCGATTCCCATTTTCCCATCAAAAGCCATGTGGTGAATTGCAACAGCTTTCATCTTCACATCGTGAAGTGATGACTCCAGTAGCGAAAACAACTGAGGTTCCCAATGTCAATGGTCCAAAAGCAAAATCTGGATTTATTGAGGAAACAGATCCGCTCCTTGAAAGTTTGTTAAAATCATTTTGGTTGTTTGAACATGGTCAACCAAGCCTATTTGACAAGCCAACAGTAGGAGAGAGCAGCAGAAATGCGGAGAATTTGGTGGAAGGTGGAGATGGAAACACTGGTATGAATGCAATTGCTGGTTCAGCCCCAGCATTGGAGGAGGATGATAGCATAAGTGACACAACTGATGCTTCCAGCAGTTTCCAAACTGATGCAGAGACTTCAACGGACTCTCAGTTGGAATCCAATGGAGAAACATAA 873 0.441 MDKHWSSRQTFERYIYDYLVKRNMHHTAEIFRNEAELPPDSASAASRDAVDVPEGFLLEWWSINSDFEFFKQMHLQDKEGLLGGKQGCNAFQEVGSSMNAEPMYQLPKNFTPVGALNRGSNLMPSHVPCGWPVFSSPSAHQKVSGEMPQFRFPFSHQKPCGELQQLSSSHREVMTPVAKTTEVPNVNGPKAKSGFIEETDPLLESLLKSFWLFEHGQPSLFDKPTVGESSRNAENLVEGGDGNTGMNAIAGSAPALEEDDSISDTTDASSSFQTDAETSTDSQLESNGET* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00878 290 SMART Lish 7 39 IPR006594 GO:0005515
Phac6g00878 290 ProSiteProfiles LIS1 homology (LisH) motif profile. 7 39 IPR006594 GO:0005515
Phac6g00878 290 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 71 IPR044716 GO:0003714
Phac6g00878 290 Pfam LisH 13 35 IPR006594 GO:0005515
Phac6g00878 290 MobiDBLite consensus disorder prediction 223 290 - -
Phac6g00878 290 MobiDBLite consensus disorder prediction 265 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00878 Phac-Chr6 13075441 13093822 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Phac6g00878 LisH 3e-08 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00878 - - vra:106776158 389.808