Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00827 ATGGGGGGGAGCGACAGCGAGGTAGAGAAATCGGCGCAGAAGGAGAAGGAGAAGAAGAAGATACAGGCTCTCGCTCCCATCGCTAAGCCCCTTGCTGGGAAGAAGCTTTGCAAGCGTACCCTAAAACTTGTTCGCAGAGCCGCTGAACACAAATGCTTAAAGAGAGGAGTCAAGGAGGTCGTTAAAAGCATTCGGAGAGGCCAAAAAGGATTTTGTGTTATCGCTGGCAACATTTCACCCATCGATGTCATCACCCATGTTCCCGTTCTCTGTGAAGAGTCTGACATTCCATACGTATATGTCCCATCTAAAGAAGACCTTGCAGGTGCAGGTGCAACTAAGAGGCCCACTTGCTGTGTTTTGGTACAGACGAAACCTACAAAGGGTGAATTAGAGCAAGGGGAACAAGAGAAACTAAAGTCTGATTATGATCAAGTTGTATCGGAAGTTACTGAGCTTACAGCTTCACTTTTTTGA 477 0.4696 MGGSDSEVEKSAQKEKEKKKIQALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPVLCEESDIPYVYVPSKEDLAGAGATKRPTCCVLVQTKPTKGELEQGEQEKLKSDYDQVVSEVTELTASLF* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00827 158 FunFam H/ACA ribonucleoprotein complex subunit NHP2 21 153 - -
Phac6g00827 158 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 16 148 - -
Phac6g00827 158 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 41 125 IPR004038 -
Phac6g00827 158 MobiDBLite consensus disorder prediction 1 20 - -
Phac6g00827 158 SUPERFAMILY L30e-like 20 127 IPR029064 -
Phac6g00827 158 Gene3D - 18 154 IPR029064 -
Phac6g00827 158 PRINTS Ribosomal protein L7A/RS6 family signature 72 85 IPR018492 -
Phac6g00827 158 PRINTS Ribosomal protein L7A/RS6 family signature 88 98 IPR018492 -
Phac6g00827 158 PRINTS Ribosomal protein L7A/RS6 family signature 53 67 IPR018492 -
Phac6g00827 158 PRINTS Ribosomal protein L7A/RS6 family signature 98 112 IPR018492 -
Phac6g00827 158 PRINTS High mobility group-like nuclear protein signature 39 54 IPR002415 GO:0003723|GO:0005730
Phac6g00827 158 PRINTS High mobility group-like nuclear protein signature 26 39 IPR002415 GO:0003723|GO:0005730
Phac6g00827 158 PRINTS High mobility group-like nuclear protein signature 100 112 IPR002415 GO:0003723|GO:0005730
Phac6g00827 158 PRINTS High mobility group-like nuclear protein signature 56 66 IPR002415 GO:0003723|GO:0005730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00827 Phac-Chr6 12671912 12673665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00827 9 149 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 27.465 1.06e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00827 K11129 - gmx:100305515 277.33