Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00825 ATGGGTACTCCAAATGGAAGAGCAATGCACAAGTCCGATGATGAAATTCCTTTTGACTCCGAAATAAATTTTCACCTGTCAGAATCTAGTCTGGTGGAGGTACGAGGATCAGATTCTGGAGAATCTCAGACTGTTCATCATGAAACGTTGGCGGGTATTGTTTATAGGAGCATAAAAGTTGTGATTTTCTCTAACAAACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTGCAGAAGTTGACTGCTCATCTTGGTTGGGTCTTTGCTCTGAGTTTGTTGGGTATCATGCCTCTGGCGGAGCGGTTAGGTTATGCTACCGAGCAGCTGGCATTTTACAGTGGAGATACTGTTGGGGGTCTTTTAAACGCTACATTTGGAAATGCAACAGAATTTATCATCTCAGTATATGCACTGAAAAGTGGAATGACACGGGTTGTCCAGCTATCTTTGCTGGGATCAATTTTGTCAAATATGTTATTGGTGCTTGGATGTGCATTCTTATGCGGTGGGATTGTGAATCATAAGAAGGAGCAAGTGTTTAACAAGGCAACTGCTTCTGTGAATTCAGGATTATTGTTGATGGCGGTCATGGGCATACTTTTTCCAGCTGTTCTACACTACACACACACTGAGGTTCGTGTTGGGAAGTCAGAGTTGTCCCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACATATTTTTTCAGTTAAAAAGTCAAAGAAGTCTCTATGTCTCTGTGAACGAGGAAGAGGGTCAGATTGGAAACATCTCAAATGATGACGAATCACCAGATATTTCTAAATGGGAATCAATAATATGGCTTTCCGTTTTGACTGCTTGGATATCAATCTTGTCCGAATATTTGGTTGGCGCTATAGAGGGAGCATCTACTGCATGGGAAATTCCAGTAGCATTTATAAGTGTCATATTGCTTCCGCTAGTGGGGAATGCAGCTGAGCATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGGGTTGCAATAGGCTCATCCACACAGATATCTATGTTTGTGATACCATTTTGTGTTGTTATTGGCTGGATAATGGGGCACCCTATGGACTTAAACTTTCAGCTTTTTGAAACTGCAGCACTATTTCTTACTGTTATAGTTGTAGCCTTCATGTTACAGGAAGGAACTGCTAATTACTTCAAAGGACTAATGCTTATTCTTTGCTATCTTATTGTGGCAGCCAGTTTTTATGTACATATAGATTCCTCTGAATAG 1287 0.4103 MGTPNGRAMHKSDDEIPFDSEINFHLSESSLVEVRGSDSGESQTVHHETLAGIVYRSIKVVIFSNKLNLLMPFGPLAILVQKLTAHLGWVFALSLLGIMPLAERLGYATEQLAFYSGDTVGGLLNATFGNATEFIISVYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVNHKKEQVFNKATASVNSGLLLMAVMGILFPAVLHYTHTEVRVGKSELSLSRFSSCVMLVAYAAYIFFQLKSQRSLYVSVNEEEGQIGNISNDDESPDISKWESIIWLSVLTAWISILSEYLVGAIEGASTAWEIPVAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWIMGHPMDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGLMLILCYLIVAASFYVHIDSSE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00825 428 FunFam Vacuolar cation/proton exchanger 118 257 - -
Phac6g00825 428 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 37 425 IPR004713 GO:0006812|GO:0008324|GO:0016020
Phac6g00825 428 NCBIfam calcium/proton exchanger 57 420 - -
Phac6g00825 428 Pfam Sodium/calcium exchanger protein 87 244 IPR004837 GO:0016020|GO:0055085
Phac6g00825 428 Pfam Sodium/calcium exchanger protein 279 419 IPR004837 GO:0016020|GO:0055085
Phac6g00825 428 FunFam Vacuolar cation/proton exchanger 266 422 - -
Phac6g00825 428 Gene3D - 250 422 IPR044880 -
Phac6g00825 428 NCBIfam calcium/proton exchanger 71 421 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00825 Phac-Chr6 12664675 12669860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00825 7 428 Antiporters AT1G55730 70.616 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00825 K07300 - gmx:100799276 778.859