Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00824 ATGGTTTTAATATCTAATTGCCAAATCAGTTACCTATCTAAGTGTTTCACTCTTCTGCTTTGGTTATCAGTCATGTGCTTGTGGTGGTTTATATCTAATACTATTATATTGTATGTTGCAGTTGGGGGTCTTTTAAACGCTACATTTGGAAATGCAACAGAATTTATCATCTCAGTATATGCACTGAAAAGTGGAATGACACGGGTTGTCCAGCTATCTTTGCTGGGATCAATTTTGTCAAATATGTTATTGGTGCTTGGATGTGCATTCTTATGCGGTGGGATTGTGAATCATAAGAAGGAGCAAGTGTTTAACAAGGCAACTGCTTCTGTGAATTCAGGATTATTGTTGATGGCGGTCATGGGCATACTTTTTCCAGCTGTTCTACACTACACACACACTGAGGTTCGTGTTGGGAAGTCAGAGTTGTCCCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACATATTTTTTCAGTTAAAAAGTCAAAGAAGTCTCTATGTCTCTGTGAACGAGGAAGAGGGTCAGATTGGAAACATCTCAAATGATGACGAATCACCAGATATTTCTAAATGGGAATCAATAATATGGCTTTCCGTTTTGACTGCTTGGATATCAATCTTGTCCGAATATTTGGTTGGCGCTATAGAGGGAGCATCTACTGCATGGGAAATTCCAGTAGCATTTATAAGTGTCATATTGCTTCCGCTAGTGGGGAATGCAGCTGAGCATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGGGTTGCAATAGGCTCATCCACACAGATATCTATGTTTGTGATACCATTTTGTGTTGTTATTGGCTGGATAATGGGGCACCCTATGGACTTAAACTTTCAGCTTTTTGAAACTGCAGCACTATTTCTTACTGTTATAGTTGTAGCCTTCATGTTACAGGAAGGAACTGCTAATTACTTCAAAGGACTAATGCTTATTCTTTGCTATCTTATTGTGGCAGCCAGTTTTTATGTACATATAGATTCCTCTGAATAG 1050 0.3905 MVLISNCQISYLSKCFTLLLWLSVMCLWWFISNTIILYVAVGGLLNATFGNATEFIISVYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVNHKKEQVFNKATASVNSGLLLMAVMGILFPAVLHYTHTEVRVGKSELSLSRFSSCVMLVAYAAYIFFQLKSQRSLYVSVNEEEGQIGNISNDDESPDISKWESIIWLSVLTAWISILSEYLVGAIEGASTAWEIPVAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWIMGHPMDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGLMLILCYLIVAASFYVHIDSSE* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00824 349 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 22 346 IPR004713 GO:0006812|GO:0008324|GO:0016020
Phac6g00824 349 Gene3D - 182 343 IPR044880 -
Phac6g00824 349 Gene3D - 36 178 IPR044880 -
Phac6g00824 349 FunFam Vacuolar cation/proton exchanger 39 178 - -
Phac6g00824 349 FunFam Vacuolar cation/proton exchanger 187 343 - -
Phac6g00824 349 NCBIfam calcium/proton exchanger 36 342 IPR004798 GO:0006816|GO:0015369
Phac6g00824 349 NCBIfam calcium/proton exchanger 40 341 - -
Phac6g00824 349 Pfam Sodium/calcium exchanger protein 15 165 IPR004837 GO:0016020|GO:0055085
Phac6g00824 349 Pfam Sodium/calcium exchanger protein 200 340 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00824 Phac-Chr6 12664675 12669860 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00824 41 349 Antiporters AT1G55730 78.317 5.93e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00824 K07300 - gmx:100799276 570.852