Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00816 ATGACTAACCAAAACAATGATTTCATTTCTACATTGGATTGTGAAATCAATAATGATAATAATGACATTATTTCTATTGATGATGAAATCGATAGGATTTTGGGGTTACCCCATGAATGGAAAAAAGACGATGACGTCGTTTCTTTGACTGATGATGATATCAATGAGATGTGGGGCTTGACTGGTGAGGAAATGATTTCTACTAGTAATGAGGTTTGTGGCGGAGCAAGTAGGGTCTCTGTATCAAATGTTTCACCTTATCAATCTACACCACTTAAGGATAATGGGGAACCTGCTCCTGAGTTTCCTACACCTACCATTCAACCTATTTCCTCTGGTGTGTTTTGTTATAATAACCCTTCTACTCCTTCCGAAGTTTCTGCCACTCGTGTTTCTGCCATATCACCAAACACTATTATATCGGAACATGTCCCATCTGGTTGGGTTCAAATGCCTAACTATTCAAATCAATCAACACCTCCCGTATTGAAGTCACATCACAAGCAATATGAGCACTGGACAGAAAATGAACATAGGATATTAGGGTTCGCCGATGAGTGGAAAAAAGACGATAACGTCGTTTTTAAGACTGATGATGATTTCCATAAGATGTTTGGCTTCAGTGGTGACGAATTGATTTCTACTAATAATGAGGTTTGTGTTGGAGCAAGTACGGTCTCTATATCAAATGTTTCTCCTCATGAATCTACATCATTTAAGGATAATGGGGGATCTGCTTATGAGTTTTCTACACTAACCACTCAACCTACTTCCCCTAATGTATTTTGTTACATTCACGCTCCTACTCCTTCCACGGTTCCTGCCACTCATGTTTCTGCCATATCACCAAACACTATTACATTCGAACATGTTCCGTCTGGTTGGGTTCAAATGCCTAACTATTTAAATCACTCAACACCTCCCGTATCGAAGTCACATCACGAGCGTTATGAGCGCTGGACAGAAAATGAACATAGGTTATTTCTTATTGGACTCCAAAAGTGTAGCCCAGGAGATTGGAAAAGCATTTCAAAATGTTACATTCCATCAAAAACTCCAACTCAAATTGCAAGTCACGCTCAAAAATATAGGCATCATCAAAATGGCCTAAAGAAAAATAAGAAGAGAAAAAGTATCCACGACGTAACCCTAGATAACATTAACATGGGTGTTGTTCCTAGTTTCATTAATCAACAACAATGTCTTCGTCCTACCTCAAATTTTTCAATTCAACCACAAAAAATGTAA 1248 0.383 MTNQNNDFISTLDCEINNDNNDIISIDDEIDRILGLPHEWKKDDDVVSLTDDDINEMWGLTGEEMISTSNEVCGGASRVSVSNVSPYQSTPLKDNGEPAPEFPTPTIQPISSGVFCYNNPSTPSEVSATRVSAISPNTIISEHVPSGWVQMPNYSNQSTPPVLKSHHKQYEHWTENEHRILGFADEWKKDDNVVFKTDDDFHKMFGFSGDELISTNNEVCVGASTVSISNVSPHESTSFKDNGGSAYEFSTLTTQPTSPNVFCYIHAPTPSTVPATHVSAISPNTITFEHVPSGWVQMPNYLNHSTPPVSKSHHERYERWTENEHRLFLIGLQKCSPGDWKSISKCYIPSKTPTQIASHAQKYRHHQNGLKKNKKRKSIHDVTLDNINMGVVPSFINQQQCLRPTSNFSIQPQKM* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00816 415 Pfam Myb-like DNA-binding domain 319 364 IPR001005 -
Phac6g00816 415 SUPERFAMILY Homeodomain-like 315 368 IPR009057 -
Phac6g00816 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 319 368 IPR017930 -
Phac6g00816 415 PANTHER TRANSCRIPTION FACTOR KUA1 292 400 - -
Phac6g00816 415 Gene3D - 317 370 - -
Phac6g00816 415 CDD SANT 319 363 IPR001005 -
Phac6g00816 415 SMART sant 316 366 IPR001005 -
Phac6g00816 415 NCBIfam myb-like DNA-binding domain, SHAQKYF class 318 367 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00816 Phac-Chr6 12624568 12628765 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac6g00816 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00816 - - pvu:PHAVU_008G085600g 364.385