Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00808 ATGAGCGATTCTGCATACAGAGTCGAAACCACACCACGCCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCACTTACCGAAAATCCGATCCTTTCAAGATCGGAAAGTGGAATTGGCATTTGTCTGTGGAGAAGAACAGGGTTTTGTTTGTTAAATTGTTTCCAGAAGTATCCAATCTTACAAGAGACAATCCTCCAATTGCATCTTTCATCATTCGGGTTGTAAGTTCTGTTGGAGATCGCAGGGCCATCGCACACCCAGAAATAAAGGACAAGGTGTTAAAGAACAACGAGGATTTTGTTTGGGCAATTGAGGTTCCACTAACTGGAAAATTCATTATTGACGTTGAGTTTCTAGATTTGAAGACTGCATCCCCAAACGGTGGAGAACCTTGTTCCATTTGGGCAGAAGGATTTACTCAGCAAAGATCAAATGCAAATGCCATAGAGTCTCTTGGTAAAATGCTAACAGAAGGAATCCACACTGACATCACCATCAATGCTTCTGATGGAAGTATAGGAGCTCACAGAGCTGTTCTTGCTGCTAGATCACCTGTATTCCGCAGCATGTTCTCACATAATCTTCAGGAGAAAGAGTTGTCCACCATAAACATCTCCGATATGTCACTTGATTCATGCCAGGCTTTTCTCAACTATCTTTATGGAATCATCAAACATGAAGACTTTCTGATTCATAGGCTGGCCCTTCTTCATGCAGCCGACAAGTATGACATATCAGATCTAAGAGATGCATGCCATGAGAGTCTTCTTGAAGACATTGACACAAAAAATGTACTTGAGAGGCTCCAAAATGCATCTCTATATCAGTTAATTAAACTGAAGATGAGTTGCCTCCGGTATCTTGTGAAGTTTGGCAAAATATATGAAATTCGGGATGATTTCAATACCTTCTTGCATAATGCAGATAGGGATCTGATTGCTGAAGTCTTCCACGAAGTTCTAGATGCTTGGAAAGGATTCTGA 987 0.4113 MSDSAYRVETTPRLAQWRIENLASCTYRKSDPFKIGKWNWHLSVEKNRVLFVKLFPEVSNLTRDNPPIASFIIRVVSSVGDRRAIAHPEIKDKVLKNNEDFVWAIEVPLTGKFIIDVEFLDLKTASPNGGEPCSIWAEGFTQQRSNANAIESLGKMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNLQEKELSTINISDMSLDSCQAFLNYLYGIIKHEDFLIHRLALLHAADKYDISDLRDACHESLLEDIDTKNVLERLQNASLYQLIKLKMSCLRYLVKFGKIYEIRDDFNTFLHNADRDLIAEVFHEVLDAWKGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00808 328 SUPERFAMILY POZ domain 147 259 IPR011333 -
Phac6g00808 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Phac6g00808 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
Phac6g00808 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Phac6g00808 328 Pfam BTB/POZ domain 155 259 IPR000210 GO:0005515
Phac6g00808 328 Gene3D Potassium Channel Kv1.1; Chain A 140 291 IPR011333 -
Phac6g00808 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00808 Phac-Chr6 12545437 12548867 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Phac6g00808 BTB 3.4e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00808 K10523 - gmx:100790186 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g00808 6 12545437 12548867 Phac6g00808 6 12545437 12548867 ECH
Phac6g00808 6 12545437 12548867 Phac8g03517 8 42611548 42614838 PCT