Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00804 ATGATTATTCAACAGCTTCATGATCAACGAGTTGTACTTGTTAATCAGGATTCCTTTTACAATAACTTTTCTGAGGAGGAACTTACACGAGTACAGGATTACAACTTTGACCATCCTGATGCTTTTGATACTGAGCAATTGCTACGTGTTATGGACAAGTTGAAGCATGGTGAAGCAGTAGATATTCCGAAGTATGATTTTAAGACTTACAAAAGTGATGTGTTAAGAAGGGTGAACCCTTCAGATGTCATAATTTTAGAAGGCATCCTTGTTTTCCATGATCAGCGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGATTGGCAAGAAGGATTAGGCGTGATACTAATGAGAAGGGTCGGGATATTGGAGCAGTTCTTGATCAGTATTCAAAATTTGTGAAACCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCTGATATAATTATACCCCGTGGAGGAGATAATCATGTGGCCATTGATTTGATTGTACAACATATCCGTACAAAGCTAGGTCAGCATGACCTGTGTAAAATATATCCGAATTTATATGTTATTCAATCAACTTTTCAGATACGGGGAATGCATACGCTGATACGTGATGCTCAAACAACAAAGCATGATTTTGTATTTTACTCTGATCGTTTGATTCGATTGGTTGTTGAACATGGTTTGGGGCATCTGCCATTTACAGAAAAACAAGTACTCACTCCCACTGGTTCTGTATACACTGGTGTTGATTTTTGTAAAAGATTGTGTGGTGTCTCTGTTATCAGAAGTGGGGAGAGCATGGAGAATGCTTTAAGAGCATGCTGCAAAGGTATCAAGATTGGGAAAATTCTAATTCACAGAGAAGGTGACAATGGGCAGCAGCTAATATATGAAAAGTTGCCAAATGATATCTCAGACAGGCATGTGTTACTCTTGGACCCTATACTTGGCACAGGTAATTCTGCTGTCCAAGCAATTTCTTTACTCATAAGGAAAGGTGTACCTGAATCCAACATCATATTTCTTAATCTCATATCTGCACCTAAAGGTGTGCATGTTGTATGCAAAAGTTTTCCAAGAATAAAGATAGTAACATCTGAGATTGAAATCGGTTTGAATGAAGATTTTCGTGTCATACCCGGCATGGGTGAGTTCGGAGATAGGTACTTTGGAACAGATGATGATGATGAGCAAATGGTGGTTTCTACACAGTAG 1236 0.3835 MIIQQLHDQRVVLVNQDSFYNNFSEEELTRVQDYNFDHPDAFDTEQLLRVMDKLKHGEAVDIPKYDFKTYKSDVLRRVNPSDVIILEGILVFHDQRVRELMNMKIFVDTDADVRLARRIRRDTNEKGRDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDAQTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVLTPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIRKGVPESNIIFLNLISAPKGVHVVCKSFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDDDEQMVVSTQ* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00804 411 FunFam Uridine kinase 1 183 - -
Phac6g00804 411 Gene3D - 184 399 IPR029057 -
Phac6g00804 411 Pfam Uracil phosphoribosyltransferase 198 399 - -
Phac6g00804 411 SUPERFAMILY PRTase-like 183 400 IPR029057 -
Phac6g00804 411 CDD UMPK 1 180 IPR000764 -
Phac6g00804 411 CDD PRTases_typeI 257 372 IPR000836 -
Phac6g00804 411 PANTHER URIDINE KINASE 3 309 - -
Phac6g00804 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 173 IPR027417 -
Phac6g00804 411 PRINTS Uridine kinase signature 126 137 - -
Phac6g00804 411 PRINTS Uridine kinase signature 112 122 - -
Phac6g00804 411 PRINTS Uridine kinase signature 12 23 - -
Phac6g00804 411 PRINTS Uridine kinase signature 57 72 - -
Phac6g00804 411 PRINTS Uridine kinase signature 148 161 - -
Phac6g00804 411 Gene3D - 1 183 IPR027417 -
Phac6g00804 411 Pfam Phosphoribulokinase / Uridine kinase family 11 168 IPR006083 GO:0005524|GO:0016301
Phac6g00804 411 FunFam Uridine kinase 184 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00804 Phac-Chr6 12519042 12526050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00804 1 402 PRT Gene Family AT4G26510 89.055 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00804 K00876 - gmx:100527893 795.038