Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00787 ATGGCTTCATTTCCTTCAAATTCTGCATCAGAACATAGCATGGCCGGTGCCCAAAACAGCCACCCTCAAGCTTCTTCACCTTCTTTCATGACTAGAGTGGCCATGAGAGTATCTAGATCAAGATGGTTCACCTTCTTGAGAAGAGTATTCCATTACCAAAATGGACCAAGATCTGATCTTGGTTCCAACCCCTTCAATTCTAGCACTTGGATGATGCTGGAGTTGATTGCTTTACTGCTCCAGATAACAATCACAACACTCACTTTGGCCATTTCAAAGAGTGAGAAGCCTATTTGGCCTATGAGGGTGTGGCTAGCAGGTTATGATATTGGGTGTGTCCTTAATCTGCTGCTACTTTGTGGCCGCTATTATCAACTCCATGTGACTCAAGGAGGTGGTCTTAACCTTTCTGATTTGGAACAGCAGAGAAACAATGAAGAATCAAGTGTGTTGAGGGGCTCACATTTGATGGACAAATGCAGAAGTTCACTAGAGCTTTTCTTTGCCATATGGTTTGTGATGGGCAATGTTTGGGCCTTTGACTCACGTTTAGGGTCATTCCAACAAGCACCTAAACTGCAGGTGTTATGCATGATCCTACTTGGTTGGAATGCAATATGCTACTCTTTCCCTTTTCTGCTGTTTTTGCTGTTGTGTTGTTGTGTGCCATTGATGAGCACCCTCCTTGGATACAACATGAGCATGGGCTCCTCTGCTAGAGGGGCATCAGATGATCAAATCTCACAAATCCCAAGTTGGAGATACAAAGGTGCTCACACCAACTTGGACTTTGCCAATGACTCTCAAACCACTCAAAGATTGATCAATGATGATCCAGAATGCTGCATTTGCTTGGCCAAGTACAAAGACAAAGAAGAAGTGAGGCAATTACCTTGTTCCCATTTGTTCCACCTAAAATGTGTGGATCAATGGCTAAGAATCATATCATGTTGCCCCCTTTGTAAACAAGGATTACAAAGGTAG 984 0.4339 MASFPSNSASEHSMAGAQNSHPQASSPSFMTRVAMRVSRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLELIALLLQITITTLTLAISKSEKPIWPMRVWLAGYDIGCVLNLLLLCGRYYQLHVTQGGGLNLSDLEQQRNNEESSVLRGSHLMDKCRSSLELFFAIWFVMGNVWAFDSRLGSFQQAPKLQVLCMILLGWNAICYSFPFLLFLLLCCCVPLMSTLLGYNMSMGSSARGASDDQISQIPSWRYKGAHTNLDFANDSQTTQRLINDDPECCICLAKYKDKEEVRQLPCSHLFHLKCVDQWLRIISCCPLCKQGLQR* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00787 327 Coils Coil 325 327 - -
Phac6g00787 327 SMART ring_2 281 321 IPR001841 -
Phac6g00787 327 Pfam RING-like zinc finger 280 308 IPR001841 -
Phac6g00787 327 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 11 325 - -
Phac6g00787 327 MobiDBLite consensus disorder prediction 1 27 - -
Phac6g00787 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 231 326 IPR013083 -
Phac6g00787 327 ProSiteProfiles Zinc finger RING-type profile. 281 322 IPR001841 -
Phac6g00787 327 SUPERFAMILY RING/U-box 271 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00787 Phac-Chr6 12412268 12416275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00787 29 325 C3H Transcription Factor Family AT4G26580 68.013 7.03e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00787 - - gmx:100818715 593.578