Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00779 ATGGGTGGTGGAAATCAAGAGGCTGTGAAGCAGTTGCAGTCCCTGATGGAAAATGTGGATGAACAGCTGAAGAACGCATTCCAGAACATGCACCAAGATTATCCAGCTGAAACATTACTACGGTTTCTCAAAGCAAGGGATTGGAATGTTGCCAAAGCCCATAAAATGTTAATTGATTGTTTGAACTGGAGAGTGGAAAATGAGATTGACAAAGTTTTAACGAAGCCTATTCCTGCGGATTTGTATAGAGACATACGGGATTCTCAACTCATAGGAATGTCTGGTTACTCAAAGGAGGGTCTACCAGTCATTGCTGTTGGTGTTGGGCTCAGTACATATGATAAAGCTTCTGACAAATACTATATACAATCACACATTCAAATCAATGAATATAGGGATCGAGTGATCTTGCCAACAGCTACGAGGAAGCATGAACGATACATTGGCACTTGTGTGAAAGTCTTGGATATGACTGGTTTAAAGTTTTCAGCTCTGAGCCAATTGAGGTTGTTGACTGCTATATCCACAATAGATGACTTAAACTACCCGGAAAAGACAGACACATACTATATTGTTAATGCACCATATGTATTCTCTGCATGTTGGAAGGTTGTAAAGCCTCTTTTGCAAGAAAGAACAAGGAGGAAAGTCCAGGTACTGCAAGGTTGTGGGAAGGAGGAATTACTAAAGGTAATGGACTATGCATCCCTCCCACACTTCTGCAGAAAAGAAGATTCCAAGTCATCCAAACATAATGCATCAGGAAACACTGAAAATTGTTTCTCCTTCAATCATGTTTTCCACCAACAACTCTACAATCACATCAAGCATCAAGCTATCATCATGGAGTCAATCTCACCTCCAATCAGACAAGGGTCCTTCTATGTGGACATTCCAGAGCCAGACCCGGATGATGCCAAAATAGCCAAAACCATAGAAACTGAGTTCCACAAATTGGAGAATCAGAAAAATGGCTTTACCAACTCACGAAATGGTGTTACAGTCAATGGTCATCGAAATACAAGCTATTAA 1032 0.407 MGGGNQEAVKQLQSLMENVDEQLKNAFQNMHQDYPAETLLRFLKARDWNVAKAHKMLIDCLNWRVENEIDKVLTKPIPADLYRDIRDSQLIGMSGYSKEGLPVIAVGVGLSTYDKASDKYYIQSHIQINEYRDRVILPTATRKHERYIGTCVKVLDMTGLKFSALSQLRLLTAISTIDDLNYPEKTDTYYIVNAPYVFSACWKVVKPLLQERTRRKVQVLQGCGKEELLKVMDYASLPHFCRKEDSKSSKHNASGNTENCFSFNHVFHQQLYNHIKHQAIIMESISPPIRQGSFYVDIPEPDPDDAKIAKTIETEFHKLENQKNGFTNSRNGVTVNGHRNTSY* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00779 343 Coils Coil 5 29 - -
Phac6g00779 343 MobiDBLite consensus disorder prediction 323 343 - -
Phac6g00779 343 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Phac6g00779 343 Pfam CRAL/TRIO, N-terminal domain 8 59 IPR011074 -
Phac6g00779 343 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 249 IPR001251 -
Phac6g00779 343 SMART sec14_4 85 246 IPR001251 -
Phac6g00779 343 CDD SEC14 82 240 IPR001251 -
Phac6g00779 343 SUPERFAMILY CRAL/TRIO N-terminal domain 18 75 IPR036273 -
Phac6g00779 343 SUPERFAMILY CRAL/TRIO domain 80 240 IPR036865 -
Phac6g00779 343 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN 1 329 - -
Phac6g00779 343 Gene3D - 4 278 IPR036865 -
Phac6g00779 343 Pfam CRAL/TRIO domain 89 240 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00779 Phac-Chr6 12359636 12365705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00779 1 336 Acyl Lipid Metabolism Gene Families AT5G47730 64.688 2.57e-160 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00779 K26544 - gmx:100817955 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g00779 6 12359636 12365705 Phac6g00779 6 12359636 12365705 ECH
Phac3g02418 3 26952300 26954240 Phac6g00779 6 12359636 12365705 PCT