Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00762 ATGTTCTTAAGAACCACCACCACCACCATCATCTTCTTCTTCCTCATCACAATCTTCTCCTTTACAACAACAATGGCTCTCTCTCACAACAACACAAACTTCTTCTCCTTCTCCTTTCCCTTCTTCACCCTCCGCAACATAACCCTCCTTGGCGACTCCTTCCTCCGCAACGGCCTCGTCGGCCTCACCCTCTCCACCACTGTCCCTGCCTCCTCCTCCGGCACCCTCCTCTTCAACAACCCCATCACCACCACCCCTTCCTTCTCTCTCTCCACCAATTTCACTTTCTCCATCACCAACACCACCACCTCCGCCATCCCCTCCTCCACCTTCTCCTTCTTTCTCAACTCCTCCCATACCCTCCTCTCCCTCCACTTCCACCCCAACCAAAACCATCTCACCCTCGACCTCACCACCACCTCAAACTCCTCCCTTACCAACCCCACTTTCGTTGATCTCAGCACTGACACTCCAATCACTTCTTGGGTTGATTATCACCATGCTGACAAGAAAAAGCTCCAAGTTTTCTTGAACTACTCGTCACCAGCCTCTTCCAAGCCTCAAAACCCTGTCTTGAGCGTTGACCTTGACCTTTATGAGTATTTTAAGGATGGTCTTTACGTGGGGTTTTCCGGTTCCACGCTAGGAAGCACCGAGCTTATCCAACTCATGAGTTGGAGTTTGGAGTTTGAGTCAAACTTGTACCCTCTGATCAATGGTTCTAGCAGCCCTTCGAGTGTTGCGGTTGAGGGCATTCCTGTTTCTTCAAATTCCACCAAGGGTAGTGATAACCGTGGTAAGAGGTTTTTGCTTGGTCTTTGTGTTGCTATTGCTGGTCCTGCTTTTTTCTGCGTCATGCTTGTGGTTTTGGGGTATGTTTCTTTTCTGAAATGGCGTGGTTTGAGGAATAAGAAAGGTTTTGGGGCAGTGGGATGTTGTCCTAAAGAGTTTGGTTACAAGGAGGTGAAGTTGGCCACTAAGGGGTTTCATGCTTCAAGGGTAATTGGGAAAGGATCTTTTGGGACTGTGTACAAGGCTTTGTTTGAGTCTTCTGGGACCATAGCTGCGGTTAAAAGGTCAAGACAGTACGACGGGAAAACCGAGTTTTTGGCCGAATTATCCATTATAGCTAGTTTGAGGCACAAGAATTTGGTTCAACTCCTAGGTTGGTGTATTGAGAAGGGTGAGTTGTTGCTTGTGTATGAGTATATGCCAAATGGAAGCTTGGACAAGGTGCTTTACCAAGAATGTGAAGGCGGTAATACTAACCATGTGTTGAGTTGGGTTCATAGGGTTAACATTGCTGTTGGGTTGGCTTCTGTTTTGAGCTACTTGCATCAAGAGTGTGAGCAGAGGGTGATTCATAGGGACATCAAGACAGGGAACATATTGCTAGATGGGAGCATGAACCCAAGGTTGGGTGATTTTGGGTTGGCCAAGCTTATGGACCATGACAAGAGTCCTGTTTCAACACTAACTGCTGGGACAATGGGGTACCTTGCTCCTGAGTATCTTCAATGTGGAATGGCAAATGAGAAGAGTGATGTGTTCAGCTATGGGGTGGTGGTGCTTGAGGTGGCTTGTGGGAGGAGGCCAATTGAGAGGGAGGGGCAGAAGATGGTGAATTTGGTGGATTGGGTTTGGGGGTTGCACTCTCAAGGGAGGATCATTGAGGCTGCTGACAGGAAGCTGAATGGGGACTTTAAGGAAGGGGAAATGAAGAGGCTTTTGCTCTTGGGGTTGAGTTGTGCTAACCCTGATAGTGCTCAGAGGCCTTCCATGAGAAGGGTGTTGCAGATTCTCAACAATGAAGGAGGAGTGTCTCTTGTGGTGCCTAAAGAAAAACCAACACTTACTTTCTCTTCTGGCTTGCCTTTGAGTCTCGAAGACATTGTTTCTGATGCTGAGGAAGACTTGAATTCTGACCAGGTTGTGTGTGAGATCAAAATTGATTGA 1956 0.478 MFLRTTTTTIIFFFLITIFSFTTTMALSHNNTNFFSFSFPFFTLRNITLLGDSFLRNGLVGLTLSTTVPASSSGTLLFNNPITTTPSFSLSTNFTFSITNTTTSAIPSSTFSFFLNSSHTLLSLHFHPNQNHLTLDLTTTSNSSLTNPTFVDLSTDTPITSWVDYHHADKKKLQVFLNYSSPASSKPQNPVLSVDLDLYEYFKDGLYVGFSGSTLGSTELIQLMSWSLEFESNLYPLINGSSSPSSVAVEGIPVSSNSTKGSDNRGKRFLLGLCVAIAGPAFFCVMLVVLGYVSFLKWRGLRNKKGFGAVGCCPKEFGYKEVKLATKGFHASRVIGKGSFGTVYKALFESSGTIAAVKRSRQYDGKTEFLAELSIIASLRHKNLVQLLGWCIEKGELLLVYEYMPNGSLDKVLYQECEGGNTNHVLSWVHRVNIAVGLASVLSYLHQECEQRVIHRDIKTGNILLDGSMNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQCGMANEKSDVFSYGVVVLEVACGRRPIEREGQKMVNLVDWVWGLHSQGRIIEAADRKLNGDFKEGEMKRLLLLGLSCANPDSAQRPSMRRVLQILNNEGGVSLVVPKEKPTLTFSSGLPLSLEDIVSDAEEDLNSDQVVCEIKID* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00762 651 Pfam Protein kinase domain 329 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00762 651 Gene3D Phosphorylase Kinase; domain 1 314 403 - -
Phac6g00762 651 SMART serkin_6 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g00762 651 PANTHER - 61 603 - -
Phac6g00762 651 FunFam L-type lectin-domain containing receptor kinase VIII.1 404 620 - -
Phac6g00762 651 ProSitePatterns Protein kinases ATP-binding region signature. 335 358 IPR017441 GO:0005524
Phac6g00762 651 CDD STKc_IRAK 335 603 - -
Phac6g00762 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Phac6g00762 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 230 IPR013320 -
Phac6g00762 651 Gene3D - 34 233 - -
Phac6g00762 651 Gene3D Transferase(Phosphotransferase) domain 1 404 607 - -
Phac6g00762 651 SUPERFAMILY Protein kinase-like (PK-like) 314 611 IPR011009 -
Phac6g00762 651 ProSiteProfiles Protein kinase domain profile. 329 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00762 Phac-Chr6 12260220 12262574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00762 10 637 Receptor kinase-like Gene Family AT5G55830 52.802 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phac6g00762 Pkinase 7.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00762 - - vum:124824905 1021.92