Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00761 ATGGAGCATGGAGGTTCCTTCTTTCACATGGATCAACATGTGAAATCAAGTTCTGTGCCTTTGCAGCAAGAAAACAACTATGCAAACATAGAAATTGCAGCACCAACAAACTCAAATGGAGGTCAAAACCCTAATTTGATTGGAAGAGATAAGAGCAAGATGCCAATTACAAATGTGACAAAAATCATGAGAAAATTTCTTCCAAACAATGCAAAAGTCTCAGATGGGGCCAAAGAGATGATTCAACAAAGTGCTACAAGCTACATTACCTTTGTAACCAAAAAAGCCAAGGAGAAATGCCTAAGTGAGTATAGAAAGATTATGAATGCAGATGACTTGTTATGGGCCATTCAAAATGTGGGCTTTGATGAATATATTGGGCCTCTTAGTACTTTCCTCCAACGTTGTCGCAACATTGAAGGAGGTACTCATGGGCCTACTTTTGGGCCTGGGCTTAACCCTATGGAGATGCCTCACCCTCCTTTGCCACCACCTCCTCCTCCTCCTCCACCACCACCACCTCCACCACCTCCACCACCACCACCACCAGCAGTTTATTCATCTGGGTTGGATTTTCCCATGCACCAAAACACCAACCCTGAAATGTTTGACACAAATGATGTGGGTGGGTACCTAGATGGTGTTGGTTGCTCAAGTAATGCTTTTATCAACTTTGATCCTTTCTCTCTCTTCCAACAGGATCAGCTGTGA 711 0.4332 MEHGGSFFHMDQHVKSSSVPLQQENNYANIEIAAPTNSNGGQNPNLIGRDKSKMPITNVTKIMRKFLPNNAKVSDGAKEMIQQSATSYITFVTKKAKEKCLSEYRKIMNADDLLWAIQNVGFDEYIGPLSTFLQRCRNIEGGTHGPTFGPGLNPMEMPHPPLPPPPPPPPPPPPPPPPPPPPPAVYSSGLDFPMHQNTNPEMFDTNDVGGYLDGVGCSSNAFINFDPFSLFQQDQL* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00761 236 Gene3D Histone, subunit A 45 145 IPR009072 GO:0046982
Phac6g00761 236 MobiDBLite consensus disorder prediction 143 202 - -
Phac6g00761 236 MobiDBLite consensus disorder prediction 153 187 - -
Phac6g00761 236 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 43 144 IPR027113 GO:0001228|GO:0006355|GO:0016602
Phac6g00761 236 SUPERFAMILY Histone-fold 53 147 IPR009072 GO:0046982
Phac6g00761 236 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 53 117 IPR003958 -
Phac6g00761 236 PRINTS CCAAT-binding transcription factor subunit A signature 81 99 - -
Phac6g00761 236 PRINTS CCAAT-binding transcription factor subunit A signature 100 118 - -
Phac6g00761 236 PRINTS CCAAT-binding transcription factor subunit A signature 119 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00761 Phac-Chr6 12254818 12258762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00761 1 140 CCAAT-HAP3 Transcription Factor Family AT1G21970 41.333 1.34e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac6g00761 CBFD_NFYB_HMF 7e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00761 K08065 - sspl:121811691 116.316