Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00759 ATGATGACTAACCAAAACAATGATTTCATTTCTACATTGGATTACGATGACGTCGTTTCTTTGACTGATGATGATATCAATGAGATGTGGGGCTTAACTGATCATGAAATGATTTCTACTAGTAATGAGGTTTGTGTTGGAGCAAGTAGGGTCTCTATATCAAATGTTCCACCTTATCAATCTACACCATTTAAGGATAATGGGGAACCTGCTTCTGAGTTTCCTACCTCTACCATTCAACGTATTTCCCCTGGTGTGTTTTGTTATAATCACGCTTCTACTCCTTCCGAAGTTTCTGCCACTCATGTTTCTACCATATCACCAAACACTATTATATCGGAACATGTCCCGTCTGGTTGGGTTCAAATGCCTAACAATTCAAATCAATCAACACCTCCCGTATTGAAGTCACATCACAAGCAATATGAGCACTGGACAGAAAATGAACATAGGTTATTTCTTATTGGACTTCAACATTGTAGTTGGGGAGATTGGAAAAACATTTCAAAATATTATATTCCATCAAAAACTCCAACTCAAATTGCAAGTCACGCTCAAAAATATAGGCATCATCAAAATGGCCTAAAGAAAAATAAGAAGAGAAAAAGTATCCACGACATATCCTTAGACGACACTAAGATATTAGGGTTCACCGATGAGTGGAAAAAAGACGATAACGTCATTTTTATAACTGATGATGATTTCAATAAGATGTTTGACTTCAGTGGTGACGAATTGATTTCTACTAATAATGAGGTTTGTGTTGGAGCAAGTACGGTCTCTATATCAAATGTTTCTCCTCATGAATCTACATCATTTAAGGATAATGGGGGATCTGCTTATGAGTTTTCTACACTGACCACTCAACCTATTTTCTCCAATGTATTTTGTTACAATCACGCTCCTACTCCTTCCACGGTTCCTGCCACTCATGTTTCTGCCATATCACCAAACACTATTATATCTGAACATGTTCCGTCTGGTTGGGTTCAAATGCCTAACTATTTAAATCACTCAACACCTCCCCTATCGAAGTCACATCACAAGCGTTATGAGCGCTGGACAGAAAATGAACATAGGTTATTTCTTATTGGACTCCAAAAGTGTAGCCCAGGAGATTGGAAAAGCATTTCAAAATGTTACATTCCATCAAAAACTTCAACTCAAATTGCAAGTCACGCTCAAAAATATAGGGATCATCAAAATGGCCTACAGAAAAATAAGAAGAGAAAAAGTATCCACGACATAACCCTAGATAACATTAACATGGGTGTTGTTCCTAGTTTCATTAATCAATAA 1299 0.3703 MMTNQNNDFISTLDYDDVVSLTDDDINEMWGLTDHEMISTSNEVCVGASRVSISNVPPYQSTPFKDNGEPASEFPTSTIQRISPGVFCYNHASTPSEVSATHVSTISPNTIISEHVPSGWVQMPNNSNQSTPPVLKSHHKQYEHWTENEHRLFLIGLQHCSWGDWKNISKYYIPSKTPTQIASHAQKYRHHQNGLKKNKKRKSIHDISLDDTKILGFTDEWKKDDNVIFITDDDFNKMFDFSGDELISTNNEVCVGASTVSISNVSPHESTSFKDNGGSAYEFSTLTTQPIFSNVFCYNHAPTPSTVPATHVSAISPNTIISEHVPSGWVQMPNYLNHSTPPLSKSHHKRYERWTENEHRLFLIGLQKCSPGDWKSISKCYIPSKTSTQIASHAQKYRDHQNGLQKNKKRKSIHDITLDNINMGVVPSFINQ* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00759 432 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 193 IPR017930 -
Phac6g00759 432 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 89 274 IPR043363 -
Phac6g00759 432 SUPERFAMILY Homeodomain-like 348 402 IPR009057 -
Phac6g00759 432 CDD SANT 353 397 IPR001005 -
Phac6g00759 432 Gene3D - 142 195 - -
Phac6g00759 432 Gene3D - 351 405 - -
Phac6g00759 432 SUPERFAMILY Homeodomain-like 139 193 IPR009057 -
Phac6g00759 432 NCBIfam myb-like DNA-binding domain, SHAQKYF class 140 192 IPR006447 GO:0003677
Phac6g00759 432 NCBIfam myb-like DNA-binding domain, SHAQKYF class 349 401 IPR006447 GO:0003677
Phac6g00759 432 CDD SANT 145 188 IPR001005 -
Phac6g00759 432 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 346 402 IPR017930 -
Phac6g00759 432 SMART sant 141 191 IPR001005 -
Phac6g00759 432 SMART sant 350 400 IPR001005 -
Phac6g00759 432 Pfam Myb-like DNA-binding domain 353 398 IPR001005 -
Phac6g00759 432 Pfam Myb-like DNA-binding domain 144 189 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00759 Phac-Chr6 12218644 12222944 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac6g00759 Myb_DNA-binding 5.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00759 - - pvu:PHAVU_004G065500g 344.739