Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00733 ATGCAATGGGTCTGCACCCTTTGCCATTGTTTTGAAATCAAGTGCATATCTGGTGTTCTGTTAACTCCTGCTGCTATTCTCTTTAAGATGGCCGTGAACAATCGCTGTTTTGTGGAATGGAAAGAGCAGTTTGTTTCACAGGAGCGTGGTAATCGTGTTGTTCACTATTACCTGAAGGATGCTGCTGGGGAATCTATCCTTGCAGTGGTGGGTACTGAGAGGAGTGTTAGGCACATGTGCTATGTTGTTGCTGAGGAGTTCCTTGAAATCTGTGGTAAGGATGGTTCCATTCCAACAGGTTTCAAATGGCGATCTAGAAGAGAGGTGGTGGATTGGTTGACATCAACGCTATCAAAGCAGAACCTGCAGGGAGATAGAAGTGTATCACCTGGTCATAACTTGGTAAAAGCTCATGAGACCACAAATGACAGTATCAATGAAATTACTTGTGCACAAATAACGGATGATAAGGACTTTCCTACGAGTAACTCCAAATTATCCAATTCAGACATTGTTTGGTCAGGAGTTGCATGGAGATGTGGCAAACAACTTAAGCATTATCCTGCTTTTTGGAGGAATGGCATCAAAATAGCTATTCAATCCTTTGTTTTTGTTATGGGGAAGGGAGATAATCATTATATTGCTTATGTAGAGGATATGTATGAAGACAGGAGGGGGCAGAAAAAGGTCAAGGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAGTTCCTGTACGAAATCCTCATCCTCGAGAAGTTTTTATCACACCTTATTCTCAAGTTATCAGTGCAGAGTGCGTAGATGGTCCTGCCACAGTCTTGACTCGAGAACACTATGAAAAGTGCATGTCTTTTTTTTCACCCACTTCGAGGGACAGAACACATTTGTGCTTTAGGCAATTTAGAAGCAACAAAGTTAAGCCCTTTGACTTGAGTAAACTGCGTGGCTACTATGCCCAACCAATTCTTTCTTGCTTGCACCTTGATTCAATTCAGAACCCTGAGAGGCTTGCAGGAGAAAATGAAGACTTGAGTGCAGGTGATGATGTGAAGGTAGGAGCCAAGAGGAGCAGAAGTGATAAGGGGTCTCCTCAGTCTTGGATAAGTCAACAGGGAGTTAGGAAATTGATGAGAAGTAAGCAAATGATGGTATACAAAACCTTCCAGGTTGCAAATTATGCAAGATCAGAAAGGAGATTACTTTCTCGGAAGCAGGTTGAGTGTCAACCTTGGTCTAATCACACATACAAGGTTGATGACAAGATTGAGTTGCTTTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTTCAGGTAGCTCGGAAACAGTTGAAAGTTCAATATGAAGATGTCCAGGATGAAGATGGAAGTGGAAATCTGGAGGAATGGGTCCCTGCTTTCAAGTTTGCCAGGCCTGATAAACTTGGGATGAGGCATTCTGGCCGCCCCACCATCAGACCTACTCCAACTCTTGAAGAACAAGAACTGGCTGTTGAGGTTGGGCATGCAGTTGATGCATGGTGGAGTGACGGCTGGTGGGAGGGGGTTGTAACTAGAATTGATCACTGTGGAGATGACAGTGTTCAAGTATACTTTCCTGGAGAATGCCTGCTGATGGAAGTGTGCAAGAAGGATTTAAGAATATCTAGAGATTGGTTAGGGGACAGTTGGATTAACATTAAGGCTAAACCTGAAATAACTACAACTATATTCTTCACAGCTAATAATAGCTTTAACACAAAGCTTTCCGTGTCCCCATCAATGGACAAAGTTGCGGACACTGTTGGTTTTGGTAATTCATGTCATGGTGATACTTTTAGTGAGAAGTGTGATGAACTGGTTATTGAAGACGAGAAACATGTGTCTTGTGAGGGCTTCACTGAAAATGAGGTCTGTATCCCGGATAATAAACCCTCTTCAGAAAAAGATACTGAAGCTGATAATATTGAGATACATGGCTGTTGTGATGAACATAACAGTGATGAGCATGAGAAAGTTAACAATGATGACAATAGTATCAAGAATGGTGATAATAATGATAATAAAGATATCAAGGTGTTTGGAACTTCTGGATTGGACCGTGAACCTGTAGAGCTCATGGAAGTGGCTGTATAA 2133 0.4233 MQWVCTLCHCFEIKCISGVLLTPAAILFKMAVNNRCFVEWKEQFVSQERGNRVVHYYLKDAAGESILAVVGTERSVRHMCYVVAEEFLEICGKDGSIPTGFKWRSRREVVDWLTSTLSKQNLQGDRSVSPGHNLVKAHETTNDSINEITCAQITDDKDFPTSNSKLSNSDIVWSGVAWRCGKQLKHYPAFWRNGIKIAIQSFVFVMGKGDNHYIAYVEDMYEDRRGQKKVKVRWFHHNQEVKGVVPVRNPHPREVFITPYSQVISAECVDGPATVLTREHYEKCMSFFSPTSRDRTHLCFRQFRSNKVKPFDLSKLRGYYAQPILSCLHLDSIQNPERLAGENEDLSAGDDVKVGAKRSRSDKGSPQSWISQQGVRKLMRSKQMMVYKTFQVANYARSERRLLSRKQVECQPWSNHTYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYEDVQDEDGSGNLEEWVPAFKFARPDKLGMRHSGRPTIRPTPTLEEQELAVEVGHAVDAWWSDGWWEGVVTRIDHCGDDSVQVYFPGECLLMEVCKKDLRISRDWLGDSWINIKAKPEITTTIFFTANNSFNTKLSVSPSMDKVADTVGFGNSCHGDTFSEKCDELVIEDEKHVSCEGFTENEVCIPDNKPSSEKDTEADNIEIHGCCDEHNSDEHEKVNNDDNSIKNGDNNDNKDIKVFGTSGLDREPVELMEVAV* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00733 710 ProSiteProfiles BAH domain profile. 195 314 IPR001025 GO:0003682
Phac6g00733 710 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 410 641 - -
Phac6g00733 710 SMART agenet_At_2 502 560 IPR014002 -
Phac6g00733 710 SMART agenet_At_2 416 481 IPR014002 -
Phac6g00733 710 MobiDBLite consensus disorder prediction 661 689 - -
Phac6g00733 710 Gene3D - 163 321 IPR043151 -
Phac6g00733 710 MobiDBLite consensus disorder prediction 343 360 - -
Phac6g00733 710 MobiDBLite consensus disorder prediction 661 687 - -
Phac6g00733 710 MobiDBLite consensus disorder prediction 341 369 - -
Phac6g00733 710 Pfam Agenet domain 421 495 IPR008395 -
Phac6g00733 710 CDD Tudor_Agenet_AtDUF_rpt1_3 418 478 - -
Phac6g00733 710 SMART BAH_4 195 314 IPR001025 GO:0003682
Phac6g00733 710 Pfam BAH domain 198 305 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00733 Phac-Chr6 11968530 11974894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00733 430 558 PHD Transcription Factor Family AT5G58610 31.343 4.35e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00733 - - gsj:114395106 1179.85