Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00732 ATGCACAATTCCTCAGTTCTGCAACTCTCTTTCTCTCCATCTCCAGTTCATGGCAATCTCAAGATGGCCGTGAACAATCGCTGTTTTGTGGAATGGAAAGAGCAGTTTGTTTCACAGGAGCGTGGTAATCGTGTTGTTCACTATTACCTGAAGGATGCTGCTGGGGAATCTATCCTTGCAGTGGTGGGTACTGAGAGGAGTGTTAGGCACATGTGCTATGTTGTTGCTGAGGAGTTCCTTGAAATCTGTGGTAAGGATGGTTCCATTCCAACAGGTTTCAAATGGCGATCTAGAAGAGAGGTGGTGGATTGGTTGACATCAACGCTATCAAAGCAGAACCTGCAGGGAGATAGAAGTGTATCACCTGGTCATAACTTGGTAAAAGCTCATGAGACCACAAATGACAGTATCAATGAAATTACTTGTGCACAAATAACGGATGATAAGGACTTTCCTACGAGTAACTCCAAATTATCCAATTCAGACATTGTTTGGTCAGGAGTTGCATGGAGATGTGGCAAACAACTTAAGCATTATCCTGCTTTTTGGAGGAATGGCATCAAAATAGCTATTCAATCCTTTGTTTTTGTTATGGGGAAGGGAGATAATCATTATATTGCTTATGTAGAGGATATGTATGAAGACAGGAGGGGGCAGAAAAAGGTCAAGGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAGTTCCTGTACGAAATCCTCATCCTCGAGAAGTTTTTATCACACCTTATTCTCAAGTTATCAGTGCAGAGTGCGTAGATGGTCCTGCCACAGTCTTGACTCGAGAACACTATGAAAAGTGCATGTCTTTTTTTTCACCCACTTCGAGGGACAGAACACATTTGTGCTTTAGGCAATTTAGAAGCAACAAAGTTAAGCCCTTTGACTTGAGTAAACTGCGTGGCTACTATGCCCAACCAATTCTTTCTTGCTTGCACCTTGATTCAATTCAGAACCCTGAGAGGCTTGCAGGAGAAAATGAAGACTTGAGTGCAGGTGATGATGTGAAGGTAGGAGCCAAGAGGAGCAGAAGTGATAAGGGGTCTCCTCAGTCTTGGATAAGTCAACAGGGAGTTAGGAAATTGATGAGAAGTAAGCAAATGATGGTATACAAAACCTTCCAGGTTGCAAATTATGCAAGATCAGAAAGGAGATTACTTTCTCGGAAGCAGGTTGAGTGTCAACCTTGGTCTAATCACACATACAAGGTTGATGACAAGATTGAGTTGCTTTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTTCAGGTAGCTCGGAAACAGTTGAAAGTTCAATATGAAGATGTCCAGGATGAAGATGGAAGTGGAAATCTGGAGGAATGGGTCCCTGCTTTCAAGTTTGCCAGGCCTGATAAACTTGGGATGAGGCATTCTGGCCGCCCCACCATCAGACCTACTCCAACTCTTGAAGAACAAGAACTGGCTGTTGAGGTTGGGCATGCAGTTGATGCATGGTGGAGTGACGGCTGGTGGGAGGGGGTTGTAACTAGAATTGATCACTGTGGAGATGACAGTGTTCAAGTATACTTTCCTGGAGAATGCCTGCTGATGGAAGTGTGCAAGAAGGATTTAAGAATATCTAGAGATTGGTTAGGGGACAGTTGGATTAACATTAAGGCTAAACCTGAAATAACTACAACTATATTCTTCACAGCTAATAATAGCTTTAACACAAAGCTTTCCGTGTCCCCATCAATGGACAAAGTTGCGGACACTGTTGGTTTTGGTAATTCATGTCATGGTGATACTTTTAGTGAGAAGTGTGATGAACTGGTTATTGAAGACGAGAAACATGTGTCTTGTGAGGGCTTCACTGAAAATGAGGTCTGTATCCCGGATAATAAACCCTCTTCAGAAAAAGATACTGAAGCTGATAATATTGAGATACATGGCTGTTGTGATGAACATAACAGTGATGAGCATGAGAAAGTTAACAATGATGACAATAGTATCAAGAATGGTGATAATAATGATAATAAAGATATCAAGGTGTTTGGAACTTCTGGATTGGACCGTGAACCTGTAGAGCTCATGGAAGTGGCTGTATAA 2109 0.4244 MHNSSVLQLSFSPSPVHGNLKMAVNNRCFVEWKEQFVSQERGNRVVHYYLKDAAGESILAVVGTERSVRHMCYVVAEEFLEICGKDGSIPTGFKWRSRREVVDWLTSTLSKQNLQGDRSVSPGHNLVKAHETTNDSINEITCAQITDDKDFPTSNSKLSNSDIVWSGVAWRCGKQLKHYPAFWRNGIKIAIQSFVFVMGKGDNHYIAYVEDMYEDRRGQKKVKVRWFHHNQEVKGVVPVRNPHPREVFITPYSQVISAECVDGPATVLTREHYEKCMSFFSPTSRDRTHLCFRQFRSNKVKPFDLSKLRGYYAQPILSCLHLDSIQNPERLAGENEDLSAGDDVKVGAKRSRSDKGSPQSWISQQGVRKLMRSKQMMVYKTFQVANYARSERRLLSRKQVECQPWSNHTYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYEDVQDEDGSGNLEEWVPAFKFARPDKLGMRHSGRPTIRPTPTLEEQELAVEVGHAVDAWWSDGWWEGVVTRIDHCGDDSVQVYFPGECLLMEVCKKDLRISRDWLGDSWINIKAKPEITTTIFFTANNSFNTKLSVSPSMDKVADTVGFGNSCHGDTFSEKCDELVIEDEKHVSCEGFTENEVCIPDNKPSSEKDTEADNIEIHGCCDEHNSDEHEKVNNDDNSIKNGDNNDNKDIKVFGTSGLDREPVELMEVAV* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00732 702 ProSiteProfiles BAH domain profile. 187 306 IPR001025 GO:0003682
Phac6g00732 702 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 398 633 - -
Phac6g00732 702 Pfam Agenet domain 413 487 IPR008395 -
Phac6g00732 702 MobiDBLite consensus disorder prediction 653 681 - -
Phac6g00732 702 SMART BAH_4 187 306 IPR001025 GO:0003682
Phac6g00732 702 Pfam BAH domain 190 297 IPR001025 GO:0003682
Phac6g00732 702 SMART agenet_At_2 494 552 IPR014002 -
Phac6g00732 702 SMART agenet_At_2 408 473 IPR014002 -
Phac6g00732 702 Gene3D - 155 313 IPR043151 -
Phac6g00732 702 MobiDBLite consensus disorder prediction 333 361 - -
Phac6g00732 702 MobiDBLite consensus disorder prediction 653 679 - -
Phac6g00732 702 MobiDBLite consensus disorder prediction 335 352 - -
Phac6g00732 702 CDD Tudor_Agenet_AtDUF_rpt1_3 410 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00732 Phac-Chr6 11968530 11974894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00732 422 550 PHD Transcription Factor Family AT5G58610 31.343 5.25e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00732 - - gsj:114395106 1181.01