Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00716 ATGATGTTGTTTGTCTCATCACTCCATTCTCTTACTCTTAGACACCTTGGCAGTAGTTTTCTGAGATATTTAGTGAAGCCGGTTTTCTTGCATGGCTGTTCTGGTTTCCTTCATCTACTGTTATTGGTGGTGCTTTTAGTGTCGCTGGTGTGGAGGAAAGTCGCAGTTGGAACCAGAGAACGTTCCACAAAGAACATTACTAATACCTTGTTTGCTAAGGCTCCACTTTGTTCCCTTCTTGTTTCGGCTTTCAATCTTCTACTCTTTTTGTTTGATTACTTTTGTTGGTATAAAAATGGTTGGTCAGAAGAAAAGCTTGCGACCCTTTTGGATTTTCTGCTCAAAACAGTTGCTTGGGGTGTTGGTGGTGTTTGCTTGCACATGGAACTCTTCATTTCAAGGGAAAGAAGATTACCATTCTTCTTCAGAGCTTGGTGCGTCCTTTTCCTCTCTGTTTCCGGCTATTGCTTTATAGTGGACTTTGCTCTCTATGAAAAGAAGCATTCTGCTTTGTCCATTCAGAGCTTAGTTTCTGATGCTTTCTCTGTGTGTGCGTGTTTATTCTTCTTTTACTTGGACTTGTTTGTAAAAAATGAGGGTGGAGTAGGAGATAGTACTTTTCAAGAATCTCTTTTGGATGCTGACTCAAGAGATGATGTGTTTGGGACAGAAGAGACCAAGGGGGGTGACACTGTTACACCTTACTCTAATGCTGGAATATTTGGCCTTCTTACCTTCTCTTGGATTGGTCCTCTAATTACTGTTGGCAGGAAGAAGTCTTTGGACCTTGAGGATGTCCCCCAACTTGACAAAAGAGACAGTTTAACTGGAGCTTTTCCAACTTTTAGGGATAGGCTTGAGGCACAATGTGGAGCTGTTAACACAGTGACCACACTTATGTTAGTGAAGTCATTAGTGTTCTCAAGCTGGAAAGAAATTATTTTCACAGCCATCCTTGCATTGCTAAACACTTTGGCTTCTTTTGTTGGTCCCTATCTTATTGATGGTTTTGTTCAATTCCTTAACGGACAACGGAAATTTGAGCACGAGGGCCTTATATTGGTGACTGCATTTTTTGTGGCAAAGCTTTTGGAATGCCTCACAAAGAGGCACTGGTTTTTTAGATTGCAGCAGGGTCGCACTTCTGGGGAAATAATCAACTTCATGACAGTTGATGCAGAAAAAGTTGGTGAGTTCAGTTGGCATCTACATGATCTGTGGTTAGTAGTTCTACAGGTTATAGTAGCCTTGTTGATTTTGTATAGAAATCTTGGGCTTGCTTCAATTTCTGGCCTTGTTGCAATTCTCATTGTAATGTGGGCAAACATTCCCCTGGGTTCAATCCAAGAGAAGTTTCATAACAAGTTGATGGAGTCAAAAGATGCAAGAATGAAAACAACATCTGAGATTTTGAGGAACATGCGGATTCTCAAACTACAAGGATGGGAAATGAAGTTTTTGTCTAACATAACTGAACTCAGAAAGATCGAGCAAGGCTGGTTAAAAAAAGTTATATACACGTTAGCCATGATCATATTTGTATTTTGGTGTGCCCCAGCATTTGTGTCAGTGGTTACTTTTGGTACTTCTATACTTGGAGGGATCCCCCTTGAGTCAGGGAAGATACTGTCTACACTAGCCACATTCCAGATTCTCCAAGAACCCATTTATAATCTTCCAGAGACAATTTCAATGATGGCACAGACCAAGGTTTCTCTTGACAGGATTGCATCTTTCCTTCGTCTGGATGAGATTGTATTTGATGTTGTGGAGAAGCTTCCACAAGGTAGTTCTAATGTAGCTATTGAAGTAGTTGATGGGAATTTCTCTTGGGATTCATTTTCCCCTAGTACAACATTGCAAAACATAAATCTCAGAGTTTTTCATGGCATGAGGGTTGCTGTTTGTGGTAGTGTTGGATCAGGCAAGTCAACTTTGCTTTCTTGTATATTAGGAGAAGTACCCAAGAAATCAGGGATTTTGAAGGTGTGTGGAACAAAGGCCTATGTAGCTCAGTCACCATGGATACAAAGTAGCACGATAGAGGATAATATATTGTTTGGCAAGGACATGGAAAGGCAAAGGTACGAGAAGGTTCTTGAAGCTTGTTGCCTAAAGAAGGATCTAGATATTCTGTCATTTGGAGATCAGACTATAATAGGAGAGAGGGGGATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGTGCTCTATACCATGATGCTGATATATATCTATTTGATGATGTGTTTAGTGCTGTGGATGCTCACACAGGATCTCATCTCTTTCAGGAATGCTTACTCGACCATTTAAGTTCAAAGACAGTGGTTTATGTTACTCATCAAGTAGAGTTCTTACCTGCTGCTGACCTTATTTTGGTCATGAAAGATGGGAAGATTATTCAAAGTGGAAAATATAGTGATCTGCTCAACTCAGGCACTGATTTTATGGAACTTGTTGGTGCTCATAAAGAAGCTTTGTCTGCACTTGATTCAATAGATGGAGGGAAAGCGTCTGATACAACAAGTACATCACAAGAGGATGTAAGTTTCGTTGTTTCTCACGGTATTGAAGAAAGGGAAGTAAAGAAAAATGGTGGAAAAGATAACAAATGTGATCCAAAAGGCCAGCTTATCCAAGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTCAGTTTATTGGAAATATGTAACAACAACATATGGAGGAGCACTTATACCACTCATATTGTTGGCTGAAATTTTGTTTCAACTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCTGTCTCAACTGATGTTGAGCCACCTGTTGGAGGAAGTGCCCTTATACTTGTCTATGTAGCTTTGGCCTTAGGAAGTTCTATCTGTGTCCTTGCTAGAGCAACACTTGTTGCTACAACTGGTTATAAGACAGCTACTTCACTCTTCAACAACATGCATTTCAGCATTTTCCGTGCTCCCATGTCATTTTTCGATGCCACTCCAAGTGGGAGAATCCTTAATAGGGCTTCTACCGATCAAAGTGCAGTGGATATAGACATTCCTTTTCAAACTGGATCATTTGCTTCCTCTGTGGTCCATGTTCTTGGAATTGTAGGAGTAATGTCTCAAGTTGCATGGCAGGTTTTCATTGTCTTTATTCCTGTTATAGCAATCAACATCTGGTATCAGCAATATTATTTACCATCAGCCCGGGAACTATCACGTTTAGTTGGGGTATGCAACGCTCCTGTCATTCAGCACTTTGCTGAAACCATATCAGGTTCATCAACCATCAGGAGCTTTGAGCAGGTGCCAAGATTTCAGCAAACAAATATGAAACTGATAGATGGATATTCTCGCCCCAAGTTCAACAATGCTGCTGCAATGGAATGGTTGTGCTTCCGATTAGATATGTTGTCTTCTATAACATTTGCCTTTTGCTTGATATTCTTGATATCTATTCCGAATGGATTCATAGAATCAGGTATTGCTGGTTTAGCTGTAACCTATGGCCTTAATCTGAACATTATACAATCATGGATGATATGGGAACTTTGCAGCTTGGAGAACAAAATTATATCAGTGGAAAGAATTCTTCAGTACACTTCCATTCCTAGTGAGCCTCCTCTTGTTGTAGAAGAAAACCGGCCACATGATTCTTGGCCATCATGTGGCAAGATTGATATTCACAACTTGCAGGTACGTTACGCTCCACATATGCCATTTGTGTTGCATGGCTTGACATGCACATTTCATGGAGGACTTAAAACTGGAATTGTTGGGAGAACAGGAAGTGGCAAATCAACTCTCATACAAACACTATTCCGAATTGTTGAGCCCACTGTTGGGAGAGTTATGATTGATGGCATCAACATCTCATCCATTGGAGTTTATGATTTGAGGTCTAGACTGAGCATTATCCCTCAGGATCCAACCATGTTTGAAGGTACTGTGAGAAGTAATCTGGACCCACTTGAAGAGTACACAGATGAACAAATTTGGGAGGCCCTTGATAAGTGTCAACTTGGAGATGAAGTCAGAAGGAAAGAAGGAAAACTAGACTCTGCAGTTTGTGAGGATGGAGAGAATTGGAGTATGGGCCAGAGGCAATTGGTGTGTCTTGGTAGAGTGCTGCTTAAGAAGAGTAGGGTCTTGGTGCTAGATGAAGCTACTGCATCTGTTGACACAGCTACAGATAATTTGATTCAGCAAACTCTAAGGCAATATTTTTCTGATTGCACAGTGATTACAATTGCCCATAGGATAACTTCTGTCATTAACAGTGATATGATTCTACTACTTCATGAAGGACTTATTGAGGAGTATGATTCCCCAGCAAGGTTGCTAGAGGACAAGTTTTCTTGTTTTGCTCAACTTGTGGCAAAGTATACCACAAGGTCCAATTCCAGTTTGGACCAACTGTAA 4431 0.4053 MMLFVSSLHSLTLRHLGSSFLRYLVKPVFLHGCSGFLHLLLLVVLLVSLVWRKVAVGTRERSTKNITNTLFAKAPLCSLLVSAFNLLLFLFDYFCWYKNGWSEEKLATLLDFLLKTVAWGVGGVCLHMELFISRERRLPFFFRAWCVLFLSVSGYCFIVDFALYEKKHSALSIQSLVSDAFSVCACLFFFYLDLFVKNEGGVGDSTFQESLLDADSRDDVFGTEETKGGDTVTPYSNAGIFGLLTFSWIGPLITVGRKKSLDLEDVPQLDKRDSLTGAFPTFRDRLEAQCGAVNTVTTLMLVKSLVFSSWKEIIFTAILALLNTLASFVGPYLIDGFVQFLNGQRKFEHEGLILVTAFFVAKLLECLTKRHWFFRLQQGRTSGEIINFMTVDAEKVGEFSWHLHDLWLVVLQVIVALLILYRNLGLASISGLVAILIVMWANIPLGSIQEKFHNKLMESKDARMKTTSEILRNMRILKLQGWEMKFLSNITELRKIEQGWLKKVIYTLAMIIFVFWCAPAFVSVVTFGTSILGGIPLESGKILSTLATFQILQEPIYNLPETISMMAQTKVSLDRIASFLRLDEIVFDVVEKLPQGSSNVAIEVVDGNFSWDSFSPSTTLQNINLRVFHGMRVAVCGSVGSGKSTLLSCILGEVPKKSGILKVCGTKAYVAQSPWIQSSTIEDNILFGKDMERQRYEKVLEACCLKKDLDILSFGDQTIIGERGINLSGGQKQRIQIARALYHDADIYLFDDVFSAVDAHTGSHLFQECLLDHLSSKTVVYVTHQVEFLPAADLILVMKDGKIIQSGKYSDLLNSGTDFMELVGAHKEALSALDSIDGGKASDTTSTSQEDVSFVVSHGIEEREVKKNGGKDNKCDPKGQLIQEEEREKGKVGFSVYWKYVTTTYGGALIPLILLAEILFQLLQIGSNYWMAWATPVSTDVEPPVGGSALILVYVALALGSSICVLARATLVATTGYKTATSLFNNMHFSIFRAPMSFFDATPSGRILNRASTDQSAVDIDIPFQTGSFASSVVHVLGIVGVMSQVAWQVFIVFIPVIAINIWYQQYYLPSARELSRLVGVCNAPVIQHFAETISGSSTIRSFEQVPRFQQTNMKLIDGYSRPKFNNAAAMEWLCFRLDMLSSITFAFCLIFLISIPNGFIESGIAGLAVTYGLNLNIIQSWMIWELCSLENKIISVERILQYTSIPSEPPLVVEENRPHDSWPSCGKIDIHNLQVRYAPHMPFVLHGLTCTFHGGLKTGIVGRTGSGKSTLIQTLFRIVEPTVGRVMIDGINISSIGVYDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRRKEGKLDSAVCEDGENWSMGQRQLVCLGRVLLKKSRVLVLDEATASVDTATDNLIQQTLRQYFSDCTVITIAHRITSVINSDMILLLHEGLIEEYDSPARLLEDKFSCFAQLVAKYTTRSNSSLDQL* 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00716 1476 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 314 568 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g00716 1476 CDD ABCC_MRP_domain1 602 802 - -
Phac6g00716 1476 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 602 825 IPR003439 GO:0005524
Phac6g00716 1476 Pfam ABC transporter transmembrane region 912 1154 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g00716 1476 Pfam ABC transporter transmembrane region 378 555 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g00716 1476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 599 824 IPR027417 -
Phac6g00716 1476 Gene3D - 1212 1464 IPR027417 -
Phac6g00716 1476 FunFam ABC transporter C family member 10 376 584 - -
Phac6g00716 1476 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 235 1464 - -
Phac6g00716 1476 SMART AAA_5 1255 1440 IPR003593 GO:0016887
Phac6g00716 1476 SMART AAA_5 629 802 IPR003593 GO:0016887
Phac6g00716 1476 Gene3D ABC transporter type 1, transmembrane domain 872 1210 IPR036640 GO:0005524|GO:0016020
Phac6g00716 1476 Gene3D ABC transporter type 1, transmembrane domain 292 584 IPR036640 GO:0005524|GO:0016020
Phac6g00716 1476 FunFam ABC transporter C family member 5 587 834 - -
Phac6g00716 1476 Gene3D - 587 837 IPR027417 -
Phac6g00716 1476 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 912 1192 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac6g00716 1476 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1231 1463 IPR003439 GO:0005524
Phac6g00716 1476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1220 1454 IPR027417 -
Phac6g00716 1476 SUPERFAMILY ABC transporter transmembrane region 304 581 IPR036640 GO:0005524|GO:0016020
Phac6g00716 1476 CDD ABC_6TM_ABCC_D1 315 576 IPR044746 GO:0140359
Phac6g00716 1476 CDD ABC_6TM_ABCC_D2 910 1204 IPR044726 GO:0140359
Phac6g00716 1476 Pfam ABC transporter 1246 1394 IPR003439 GO:0005524
Phac6g00716 1476 FunFam ABC transporter C family member 5 873 1210 - -
Phac6g00716 1476 Pfam ABC transporter 620 753 IPR003439 GO:0005524
Phac6g00716 1476 SUPERFAMILY ABC transporter transmembrane region 909 1211 IPR036640 GO:0005524|GO:0016020
Phac6g00716 1476 ProSitePatterns ABC transporters family signature. 727 741 IPR017871 GO:0005524|GO:0016887
Phac6g00716 1476 CDD ABCC_MRP_domain2 1227 1447 - -
Phac6g00716 1476 FunFam ABC transporter C family member 3 1212 1464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00716 Phac-Chr6 11865883 11872063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g00716 602 853 Calmodulin-binding Proteins AT2G36910 30.515 3.41e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00716 - K05666 gmx:100775358 2419.42